Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 MIR4260-201ENST00000583107 67 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 AC119403.2-201ENST00000590960 598 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 AC087468.1-201ENST00000604365 630 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 MIR6798-201ENST00000612887 67 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 MAPK10-344ENST00000641718 3746 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 CASC19-248ENST00000641674 1356 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 RNU6-171P-201ENST00000384354 107 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 MIR1286-201ENST00000408112 78 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 RPS4XP5-201ENST00000419038 768 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AC099677.3-201ENST00000427081 395 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 FMO7P-201ENST00000436045 768 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AC005297.1-201ENST00000444765 862 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 OR7L1P-201ENST00000456181 380 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 RPS17P15-201ENST00000475609 349 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 RPS23P1-201ENST00000491662 432 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AC006499.3-201ENST00000506077 748 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 RNU4-18P-201ENST00000516751 149 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 RN7SKP5-201ENST00000517045 272 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 MTATP6P25-201ENST00000574491 261 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AL136295.6-201ENST00000610486 658 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AC007204.2-201ENST00000615022 616 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AC118658.2-201ENST00000618697 459 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AF117829.2-201ENST00000619538 361 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 AL450226.2-201ENST00000622913 439 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 SAMMSON-227ENST00000642114 1199 ntBASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.84□□□□□ -1.47
LYSMD4Q5XG99 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
LYSMD4Q5XG99 AC096921.2-201ENST00000561507 1916 ntBASIC5.84□□□□□ -1.48
LYSMD4Q5XG99 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AC109780.1-201ENST00000451768 1344 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 NPM1P38-201ENST00000403835 865 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 RFESDP1-201ENST00000422350 461 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 KATNBL1P2-201ENST00000433311 835 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AC012075.1-201ENST00000436549 580 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 PTMAP6-201ENST00000439110 327 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 RNU6-775P-201ENST00000459318 96 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AP002371.1-201ENST00000463604 433 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AP001960.1-201ENST00000506494 658 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 OR4A42P-201ENST00000531397 938 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 OR10G5P-201ENST00000532733 358 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AC145423.1-201ENST00000605712 336 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms