Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 GTF2IP23-201ENST00000423746 351 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH1Q08174 FDPSP1-201ENST00000424976 1071 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 ARL6IP1P2-201ENST00000431356 563 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC241584.1-201ENST00000438469 1241 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 TRIM60P18-201ENST00000441518 828 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC013429.1-201ENST00000456604 422 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AL603882.1-201ENST00000463059 681 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC135999.1-201ENST00000478962 479 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
PCDH1Q08174 RN7SL314P-201ENST00000490735 292 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 RN7SL516P-201ENST00000496127 297 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC105391.1-201ENST00000503155 1045 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 GAPDHP38-201ENST00000503632 1002 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC109471.1-201ENST00000511631 612 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC109445.1-201ENST00000512356 383 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 IGLV1-62-201ENST00000518003 441 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 NPM1P6-201ENST00000521088 871 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 OR4A43P-201ENST00000532938 908 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC044913.1-201ENST00000557200 430 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.08□□□□□ -1.28
PCDH1Q08174 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC068020.1-201ENST00000594215 661 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC130352.1-201ENST00000602979 661 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC009220.3-201ENST00000604318 586 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 LSM1P2-201ENST00000604911 322 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC026951.2-201ENST00000613847 241 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDH1Q08174 MIR6829-201ENST00000620375 67 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AF001550.2-201ENST00000636643 217 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 AC099654.10-201ENST00000640395 161 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 MAPK10-270ENST00000641102 3538 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDH1Q08174 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PCDH1Q08174 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDH1Q08174 OR4C1P-202ENST00000641065 1569 ntBASIC7.08□□□□□ -1.28
PCDH1Q08174 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDH1Q08174 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDH1Q08174 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 NCOA4P3-201ENST00000513203 1877 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AL080312.1-201ENST00000256654 824 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDH1Q08174 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDH1Q08174 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 RNU6-707P-201ENST00000364647 95 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 OR1L1-202ENST00000373686 1083 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 PTMAP8-201ENST00000397729 342 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 RPS15AP38-201ENST00000413110 372 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDH1Q08174 CYCSP46-201ENST00000423569 204 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 MED15P9-201ENST00000424716 533 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 BX119917.1-201ENST00000432517 502 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDH1Q08174 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDH1Q08174 LSM3P3-201ENST00000436601 306 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 UBE2V1P8-201ENST00000437166 265 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AC091862.1-201ENST00000438016 1100 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 AC098614.3-201ENST00000438957 440 ntBASIC7.07□□□□□ -1.28
PCDH1Q08174 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDH1Q08174 WASF1P1-201ENST00000447560 1131 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms