Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TMEM97P2-201ENST00000517841 403 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AL163952.1-202ENST00000569625 600 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC060780.2-201ENST00000589047 198 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC006115.2-201ENST00000596823 202 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 NDUFB9P1-201ENST00000604683 510 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 FAM72A-208ENST00000607379 1139 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 uc_338.26-201ENST00000612659 160 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC099654.15-201ENST00000639802 509 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 PCAT14-202ENST00000627127 3935 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.53□□□□□ -1.69
HIST1H1AQ02539 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
HIST1H1AQ02539 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AL078621.3-201ENST00000623707 2042 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 RN7SKP38-201ENST00000410782 309 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC245096.1-201ENST00000413104 546 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 RPS15AP30-201ENST00000420976 390 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 VN1R20P-201ENST00000425215 966 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 MED28P3-201ENST00000444288 531 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC004890.1-201ENST00000461005 181 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 RPL5P22-201ENST00000480199 884 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC083795.1-201ENST00000491760 320 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AP002453.1-201ENST00000492327 668 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 MRPS5P3-201ENST00000515577 166 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 RN7SKP288-201ENST00000516227 268 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 RNA5SP230-201ENST00000517039 122 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 MIR3157-201ENST00000578688 85 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 AC005224.3-201ENST00000584683 2140 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 LINC01613-201ENST00000561476 2780 ntBASIC4.52□□□□□ -1.69
HIST1H1AQ02539 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HIST1H1AQ02539 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AL360270.2-201ENST00000562952 5985 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms