Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SPCS3P61009 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.85□□□□□ -1.63
SPCS3P61009 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.85□□□□□ -1.63
SPCS3P61009 RN7SKP144-201ENST00000411108 279 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 METTL15P3-201ENST00000415522 1221 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 AL360013.1-201ENST00000419031 858 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SPCS3P61009 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.85□□□□□ -1.63
SPCS3P61009 RPS15AP30-201ENST00000420976 390 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SPCS3P61009 OR3D1P-201ENST00000438288 955 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.85□□□□□ -1.63
SPCS3P61009 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SPCS3P61009 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.85□□□□□ -1.63
SPCS3P61009 RPS6P2-201ENST00000454208 705 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 AL133351.3-201ENST00000454998 193 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.85□□□□□ -1.63
SPCS3P61009 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.85□□□□□ -1.63
SPCS3P61009 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.85□□□□□ -1.63
SPCS3P61009 AC073648.3-201ENST00000504939 925 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 RNA5SP75-201ENST00000516841 111 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.85□□□□□ -1.63
SPCS3P61009 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.85□□□□□ -1.63
SPCS3P61009 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.85□□□□□ -1.63
SPCS3P61009 AC127381.1-201ENST00000555979 939 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 AC037479.1-201ENST00000558361 625 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.85□□□□□ -1.63
SPCS3P61009 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.85□□□□□ -1.63
SPCS3P61009 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.85□□□□□ -1.63
SPCS3P61009 RN7SL32P-201ENST00000580514 281 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 AL355974.3-201ENST00000617383 467 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 AC027506.1-201ENST00000621395 198 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.85□□□□□ -1.63
SPCS3P61009 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC4.85□□□□□ -1.63
SPCS3P61009 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.85□□□□□ -1.63
SPCS3P61009 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SPCS3P61009 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SPCS3P61009 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SPCS3P61009 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SPCS3P61009 AL133243.2-201ENST00000610331 1621 ntBASIC4.85□□□□□ -1.63
SPCS3P61009 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
SPCS3P61009 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.85□□□□□ -1.63
SPCS3P61009 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SPCS3P61009 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SPCS3P61009 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SPCS3P61009 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SPCS3P61009 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SPCS3P61009 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SPCS3P61009 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.84□□□□□ -1.63
SPCS3P61009 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SPCS3P61009 RPL11P3-201ENST00000395256 523 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 AL033519.1-201ENST00000407266 307 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.84□□□□□ -1.63
SPCS3P61009 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.84□□□□□ -1.63
SPCS3P61009 RPS7P8-201ENST00000418311 581 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 AC006509.1-201ENST00000420788 634 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.84□□□□□ -1.63
SPCS3P61009 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SPCS3P61009 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.84□□□□□ -1.63
SPCS3P61009 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.84□□□□□ -1.63
SPCS3P61009 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.84□□□□□ -1.63
SPCS3P61009 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.84□□□□□ -1.63
SPCS3P61009 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.84□□□□□ -1.63
SPCS3P61009 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.84□□□□□ -1.63
SPCS3P61009 RSU1P1-201ENST00000453416 441 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 TREML3P-201ENST00000457327 501 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 RN7SL104P-201ENST00000498686 293 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.84□□□□□ -1.63
SPCS3P61009 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.84□□□□□ -1.63
SPCS3P61009 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.84□□□□□ -1.63
SPCS3P61009 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.84□□□□□ -1.63
SPCS3P61009 OR56A7P-201ENST00000524865 941 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 AC008126.1-201ENST00000549019 480 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 AC068408.1-201ENST00000577406 1144 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 AC006120.1-201ENST00000579375 546 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 AC022106.1-201ENST00000612834 766 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.84□□□□□ -1.63
SPCS3P61009 MIR6503-201ENST00000622884 86 ntBASIC4.84□□□□□ -1.63
SPCS3P61009 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SPCS3P61009 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SPCS3P61009 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPCS3P61009 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SPCS3P61009 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms