Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RN7SKP35-201ENST00000517210 151 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 AC009879.1-201ENST00000520029 839 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 OR7E10P-201ENST00000526420 991 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN20P56880 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN20P56880 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN20P56880 AC007346.1-201ENST00000569208 867 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 MIR3189-201ENST00000578735 73 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 AC134669.1-201ENST00000581275 672 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN20P56880 AC073333.2-201ENST00000603589 769 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 RFPL4AP6-201ENST00000616792 846 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN20P56880 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN20P56880 OR7A1P-202ENST00000641542 1158 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 CDY11P-201ENST00000447168 1651 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN20P56880 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN20P56880 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CLDN20P56880 AC022164.1-201ENST00000568767 2673 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN20P56880 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CLDN20P56880 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN20P56880 AC104966.1-201ENST00000467010 1464 ntBASIC5.58□□□□□ -1.52
CLDN20P56880 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 IFIT1P1-201ENST00000400497 1449 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN20P56880 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN20P56880 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN20P56880 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN20P56880 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLDN20P56880 AC092692.1-201ENST00000623625 2595 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLDN20P56880 MIR621-201ENST00000384919 96 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN20P56880 AL096800.1-201ENST00000405326 893 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 AL358178.1-201ENST00000407698 397 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.57□□□□□ -1.52
CLDN20P56880 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN20P56880 AC015977.1-201ENST00000418887 292 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.57□□□□□ -1.52
CLDN20P56880 OR3D1P-201ENST00000438288 955 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN20P56880 GAPDHP23-201ENST00000444823 993 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN20P56880 MORF4L1P4-201ENST00000450245 976 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 PPIAP7-201ENST00000454070 489 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 AP002884.1-201ENST00000479691 655 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 AC093719.1-201ENST00000480427 441 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN20P56880 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN20P56880 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.57□□□□□ -1.52
CLDN20P56880 AP000620.1-201ENST00000527147 504 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 NPM1P42-201ENST00000560329 862 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 AC002310.3-201ENST00000569728 723 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN20P56880 AL499605.1-201ENST00000604628 403 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 AC092681.3-201ENST00000609463 678 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN20P56880 MIR6071-201ENST00000616741 78 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 AL512652.1-201ENST00000619006 500 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN20P56880 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 AC004656.1-201ENST00000568479 4951 ntBASIC5.57□□□□□ -1.52
CLDN20P56880 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN20P56880 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.57□□□□□ -1.52
CLDN20P56880 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLDN20P56880 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN20P56880 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.56□□□□□ -1.52
CLDN20P56880 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.56□□□□□ -1.52
CLDN20P56880 AC114876.1-201ENST00000490962 1366 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 AC024587.1-201ENST00000505925 2157 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN20P56880 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN20P56880 AC130360.2-201ENST00000533477 1556 ntBASIC5.56□□□□□ -1.52
CLDN20P56880 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.56□□□□□ -1.52
CLDN20P56880 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms