Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC4P56524 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC4P56524 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HDAC4P56524 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HDAC4P56524 AC016583.1-201ENST00000624221 2431 ntBASIC6.34□□□□□ -1.4
HDAC4P56524 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC4P56524 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HDAC4P56524 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HDAC4P56524 AL132875.1-201ENST00000403623 949 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC4P56524 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC4P56524 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC4P56524 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.33□□□□□ -1.4
HDAC4P56524 AC012497.1-201ENST00000429392 575 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 AL389925.1-201ENST00000432257 728 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 AL731534.1-201ENST00000434711 269 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 BX679664.2-201ENST00000439282 283 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 SEPT14P12-201ENST00000442280 560 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 RAD1P2-201ENST00000446414 663 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 EEF1B2P3-201ENST00000447718 678 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 AC144530.1-201ENST00000452862 555 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC4P56524 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.33□□□□□ -1.4
HDAC4P56524 AC104339.1-201ENST00000465478 348 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 AL355032.1-201ENST00000472981 438 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 RN7SL170P-201ENST00000487098 295 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 AC114728.1-201ENST00000488289 483 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC4P56524 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC4P56524 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.33□□□□□ -1.4
HDAC4P56524 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.33□□□□□ -1.4
HDAC4P56524 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.33□□□□□ -1.4
HDAC4P56524 ASNSP4-201ENST00000511103 447 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC4P56524 AC130364.2-201ENST00000528639 604 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC4P56524 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC4P56524 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC4P56524 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.33□□□□□ -1.4
HDAC4P56524 MIR132-201ENST00000591554 101 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC4P56524 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.33□□□□□ -1.4
HDAC4P56524 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.33□□□□□ -1.4
HDAC4P56524 VN1R81P-201ENST00000602085 372 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 AC073333.2-201ENST00000603589 769 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 GMCL1P2-201ENST00000605230 823 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 AC096861.1-201ENST00000616652 240 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 AC073593.1-201ENST00000624500 411 ntBASIC6.33□□□□□ -1.4
HDAC4P56524 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HDAC4P56524 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC4P56524 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
HDAC4P56524 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HDAC4P56524 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC4P56524 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC4P56524 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HDAC4P56524 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.32□□□□□ -1.4
HDAC4P56524 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC4P56524 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HDAC4P56524 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HDAC4P56524 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HDAC4P56524 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.32□□□□□ -1.4
HDAC4P56524 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC4P56524 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HDAC4P56524 RNU1-134P-201ENST00000362935 165 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 RN7SKP15-201ENST00000364742 309 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.32□□□□□ -1.4
HDAC4P56524 AL121835.1-201ENST00000404250 354 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 NACAP7-201ENST00000407371 609 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 SNORA77.2-201ENST00000408571 112 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.32□□□□□ -1.4
HDAC4P56524 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.32□□□□□ -1.4
HDAC4P56524 RSL24D1P8-201ENST00000434442 492 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 XKRYP6-201ENST00000440468 1116 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 XKRYP3-201ENST00000442113 1116 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.32□□□□□ -1.4
HDAC4P56524 RPL5P7-201ENST00000444235 813 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AC073072.2-201ENST00000447425 348 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 OR52Y1P-201ENST00000452418 828 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 MTCYBP14-201ENST00000457471 715 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AL445687.2-201ENST00000458156 728 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 HMGN1P8-201ENST00000463578 288 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 RN7SL352P-201ENST00000466002 277 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AC021006.1-201ENST00000489849 553 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 RPL37P23-201ENST00000492641 294 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.32□□□□□ -1.4
HDAC4P56524 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.32□□□□□ -1.4
HDAC4P56524 HSD3BP3-201ENST00000514706 994 ntBASIC6.32□□□□□ -1.4
HDAC4P56524 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.32□□□□□ -1.4
HDAC4P56524 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms