Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 RLIMP2-201ENST00000427891 1563 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 AP000432.2-201ENST00000624164 2048 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 AC119674.1-213ENST00000641177 1386 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.79□□□□□ -1.48
ABCD3P28288 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.78□□□□□ -1.48
ABCD3P28288 AC110373.1-201ENST00000505994 3505 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
ABCD3P28288 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
ABCD3P28288 RAD1P1-201ENST00000231383 813 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 RNA5SP232-201ENST00000364144 119 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 RNU6-31P-201ENST00000384388 108 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 YWHAZP6-201ENST00000399764 738 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AL445238.1-204ENST00000400311 463 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.78□□□□□ -1.48
ABCD3P28288 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.78□□□□□ -1.48
ABCD3P28288 GAPDHP59-201ENST00000435908 267 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.78□□□□□ -1.48
ABCD3P28288 DNAJC19P5-201ENST00000443295 316 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.78□□□□□ -1.48
ABCD3P28288 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.78□□□□□ -1.48
ABCD3P28288 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.78□□□□□ -1.48
ABCD3P28288 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.78□□□□□ -1.48
ABCD3P28288 EEF1B2P3-201ENST00000447718 678 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 CALM1P2-201ENST00000452941 448 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 RANP2-201ENST00000456833 229 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 SUMO1P1-201ENST00000497904 306 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AC112484.3-201ENST00000505910 329 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AC095052.1-201ENST00000509955 863 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 RN7SKP248-201ENST00000516278 305 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.78□□□□□ -1.48
ABCD3P28288 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.78□□□□□ -1.48
ABCD3P28288 OR4A6P-201ENST00000534364 970 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.78□□□□□ -1.48
ABCD3P28288 CR383656.14-201ENST00000551951 406 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.78□□□□□ -1.48
ABCD3P28288 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.78□□□□□ -1.48
ABCD3P28288 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.78□□□□□ -1.48
ABCD3P28288 AC090079.2-201ENST00000575289 768 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 TMF1P1-201ENST00000576058 373 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.78□□□□□ -1.48
ABCD3P28288 PPATP2-201ENST00000605635 508 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AC004775.1-201ENST00000607389 753 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AL135786.2-201ENST00000608422 615 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.78□□□□□ -1.48
ABCD3P28288 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ABCD3P28288 AC103798.2-201ENST00000624292 632 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.78□□□□□ -1.48
ABCD3P28288 AC111152.1-202ENST00000635848 339 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.78□□□□□ -1.48
ABCD3P28288 AL596275.2-207ENST00000641188 675 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.78□□□□□ -1.48
ABCD3P28288 AL359715.3-201ENST00000569267 2123 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 AL121950.1-201ENST00000624993 2077 ntBASIC5.78□□□□□ -1.48
ABCD3P28288 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ABCD3P28288 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.77□□□□□ -1.48
ABCD3P28288 AL161912.4-201ENST00000623889 2468 ntBASIC5.77□□□□□ -1.48
ABCD3P28288 AL133243.2-201ENST00000610331 1621 ntBASIC5.77□□□□□ -1.48
ABCD3P28288 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ABCD3P28288 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ABCD3P28288 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ABCD3P28288 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
ABCD3P28288 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ABCD3P28288 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.77□□□□□ -1.49
ABCD3P28288 MT-RNR2-201ENST00000387347 1559 ntBASIC5.77□□□□□ -1.49
ABCD3P28288 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ABCD3P28288 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ABCD3P28288 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ABCD3P28288 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.77□□□□□ -1.49
ABCD3P28288 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.77□□□□□ -1.49
ABCD3P28288 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ABCD3P28288 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ABCD3P28288 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.77□□□□□ -1.49
ABCD3P28288 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ABCD3P28288 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.77□□□□□ -1.49
ABCD3P28288 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ABCD3P28288 MIR433-201ENST00000384837 93 ntBASIC5.77□□□□□ -1.49
ABCD3P28288 MT-TP-201ENST00000387461 68 ntBASIC5.77□□□□□ -1.49
ABCD3P28288 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ABCD3P28288 RPA2P2-201ENST00000419698 796 ntBASIC5.77□□□□□ -1.49
ABCD3P28288 NME1P1-201ENST00000420914 382 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms