Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RPL12P39-201ENST00000455456 496 ntBASIC6.44□□□□□ -1.38
COL11A1P12107 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL11A1P12107 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.44□□□□□ -1.38
COL11A1P12107 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.44□□□□□ -1.38
COL11A1P12107 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.44□□□□□ -1.38
COL11A1P12107 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.44□□□□□ -1.38
COL11A1P12107 AL163952.1-202ENST00000569625 600 ntBASIC6.44□□□□□ -1.38
COL11A1P12107 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.44□□□□□ -1.38
COL11A1P12107 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.44□□□□□ -1.38
COL11A1P12107 AC087783.2-201ENST00000605070 562 ntBASIC6.44□□□□□ -1.38
COL11A1P12107 AC037198.3-201ENST00000616754 526 ntBASIC6.44□□□□□ -1.38
COL11A1P12107 AC008115.4-201ENST00000619780 775 ntBASIC6.44□□□□□ -1.38
COL11A1P12107 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.44□□□□□ -1.38
COL11A1P12107 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL11A1P12107 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL11A1P12107 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL11A1P12107 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.44□□□□□ -1.38
COL11A1P12107 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL11A1P12107 CCDC162P-202ENST00000368966 6751 ntBASIC6.44□□□□□ -1.38
COL11A1P12107 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
COL11A1P12107 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL11A1P12107 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL11A1P12107 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
COL11A1P12107 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COL11A1P12107 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COL11A1P12107 RNA5SP335-201ENST00000363817 110 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 RN7SKP151-201ENST00000410230 316 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.43□□□□□ -1.38
COL11A1P12107 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.43□□□□□ -1.38
COL11A1P12107 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.43□□□□□ -1.38
COL11A1P12107 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL11A1P12107 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL11A1P12107 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.43□□□□□ -1.38
COL11A1P12107 OLMALINC-203ENST00000641087 3779 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.43□□□□□ -1.38
COL11A1P12107 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL11A1P12107 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL11A1P12107 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.43□□□□□ -1.38
COL11A1P12107 HSPD1P8-201ENST00000400121 1658 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL11A1P12107 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL11A1P12107 OR4K12P-201ENST00000406538 961 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 RPL7P6-201ENST00000480903 738 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.43□□□□□ -1.38
COL11A1P12107 OR4A46P-201ENST00000527255 933 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.43□□□□□ -1.38
COL11A1P12107 OR11J2P-201ENST00000555298 907 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 AL049872.1-201ENST00000556323 322 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 MRPS21P7-201ENST00000566937 238 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.43□□□□□ -1.38
COL11A1P12107 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.43□□□□□ -1.38
COL11A1P12107 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 AL137246.2-201ENST00000613439 662 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL11A1P12107 ZNF840P-201ENST00000504759 1996 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 TTC3P1-201ENST00000399586 6081 ntBASIC6.43□□□□□ -1.38
COL11A1P12107 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL11A1P12107 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL11A1P12107 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.43□□□□□ -1.38
COL11A1P12107 MAPK10-338ENST00000641647 3362 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL11A1P12107 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.42□□□□□ -1.38
COL11A1P12107 AC022164.1-201ENST00000568767 2673 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.42□□□□□ -1.38
COL11A1P12107 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL11A1P12107 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
COL11A1P12107 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.42□□□□□ -1.38
COL11A1P12107 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL11A1P12107 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL11A1P12107 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.42□□□□□ -1.38
COL11A1P12107 RNA5SP91-201ENST00000390902 119 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.42□□□□□ -1.38
COL11A1P12107 AC073410.1-201ENST00000435125 589 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 LDHAP2-201ENST00000437325 985 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.42□□□□□ -1.38
COL11A1P12107 OR5M14P-201ENST00000506803 618 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 HIGD1AP14-201ENST00000507617 282 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL11A1P12107 AC253576.1-201ENST00000511645 1156 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 MIR2117-201ENST00000516780 80 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 IGLV2-28-201ENST00000520681 304 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.42□□□□□ -1.38
COL11A1P12107 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.42□□□□□ -1.38
COL11A1P12107 AC078878.1-201ENST00000539832 958 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.42□□□□□ -1.38
COL11A1P12107 MIR7155-201ENST00000615925 56 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 AC109583.2-201ENST00000617367 129 ntBASIC6.42□□□□□ -1.38
COL11A1P12107 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL11A1P12107 AL592429.1-201ENST00000403909 1473 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms