Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CLPTM1O96005 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
CLPTM1O96005 MRPS6P2-201ENST00000381143 370 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AL391419.1-201ENST00000398901 1275 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 RN7SKP221-201ENST00000410420 301 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 RN7SKP38-201ENST00000410782 309 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.61□□□□□ -1.51
CLPTM1O96005 GPS2P1-201ENST00000411761 986 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 CASKP1-201ENST00000412870 582 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.61□□□□□ -1.51
CLPTM1O96005 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.61□□□□□ -1.51
CLPTM1O96005 AL645939.3-201ENST00000435408 225 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 CUBNP2-201ENST00000443534 1139 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC092106.1-201ENST00000444291 373 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC234771.2-201ENST00000445718 597 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 CBX1P2-201ENST00000453841 458 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC007386.1-201ENST00000455212 582 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 RN7SL836P-201ENST00000476140 296 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC079080.1-201ENST00000479841 822 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 EIF3LP3-201ENST00000495197 822 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 AC010343.2-201ENST00000510162 224 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.61□□□□□ -1.51
CLPTM1O96005 ACTR6P1-201ENST00000514311 1104 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.61□□□□□ -1.51
CLPTM1O96005 AC116917.1-201ENST00000520558 305 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CLPTM1O96005 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.61□□□□□ -1.51
CLPTM1O96005 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.61□□□□□ -1.51
CLPTM1O96005 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CLPTM1O96005 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.61□□□□□ -1.51
CLPTM1O96005 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.61□□□□□ -1.51
CLPTM1O96005 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.61□□□□□ -1.51
CLPTM1O96005 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.61□□□□□ -1.51
CLPTM1O96005 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.61□□□□□ -1.51
CLPTM1O96005 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.61□□□□□ -1.51
CLPTM1O96005 AC012368.3-201ENST00000604190 219 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC015849.6-201ENST00000605454 474 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC008833.1-201ENST00000611633 691 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC107905.1-201ENST00000616204 426 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC092376.2-201ENST00000622621 4116 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 AC099654.6-201ENST00000636487 512 ntBASIC5.61□□□□□ -1.51
CLPTM1O96005 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLPTM1O96005 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLPTM1O96005 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.61□□□□□ -1.51
CLPTM1O96005 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC005702.3-201ENST00000585345 1447 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CLPTM1O96005 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AL133260.1-201ENST00000405720 405 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 RN7SKP146-201ENST00000410242 334 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CLPTM1O96005 RPL7AP51-201ENST00000422016 760 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.6□□□□□ -1.51
CLPTM1O96005 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC097523.2-201ENST00000435551 652 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC016908.1-201ENST00000442571 1219 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 FCF1P7-201ENST00000451185 558 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 RPL12P39-201ENST00000455456 496 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.6□□□□□ -1.51
CLPTM1O96005 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.6□□□□□ -1.51
CLPTM1O96005 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.6□□□□□ -1.51
CLPTM1O96005 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms