Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX4O60224 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.55□□□□□ -1.52
SSX4O60224 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.55□□□□□ -1.52
SSX4O60224 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX4O60224 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX4O60224 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.55□□□□□ -1.52
SSX4O60224 GCNT1P4-201ENST00000404096 329 ntBASIC5.55□□□□□ -1.52
SSX4O60224 CBX1P3-201ENST00000413296 527 ntBASIC5.55□□□□□ -1.52
SSX4O60224 AC019070.1-201ENST00000415008 1024 ntBASIC5.55□□□□□ -1.52
SSX4O60224 AL512504.1-201ENST00000415494 778 ntBASIC5.55□□□□□ -1.52
SSX4O60224 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.55□□□□□ -1.52
SSX4O60224 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX4O60224 HMGN1P2-201ENST00000445197 310 ntBASIC5.55□□□□□ -1.52
SSX4O60224 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 MTND6P5-201ENST00000448266 512 ntBASIC5.55□□□□□ -1.52
SSX4O60224 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX4O60224 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.55□□□□□ -1.52
SSX4O60224 AC097486.1-201ENST00000515331 210 ntBASIC5.55□□□□□ -1.52
SSX4O60224 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX4O60224 AC008429.2-201ENST00000523057 864 ntBASIC5.55□□□□□ -1.52
SSX4O60224 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX4O60224 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX4O60224 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX4O60224 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX4O60224 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX4O60224 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX4O60224 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.55□□□□□ -1.52
SSX4O60224 AC005726.4-201ENST00000582858 458 ntBASIC5.55□□□□□ -1.52
SSX4O60224 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX4O60224 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX4O60224 AC015802.5-201ENST00000607478 399 ntBASIC5.55□□□□□ -1.52
SSX4O60224 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.55□□□□□ -1.52
SSX4O60224 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 AC009032.1-201ENST00000617574 431 ntBASIC5.55□□□□□ -1.52
SSX4O60224 RNA5SP439-201ENST00000617595 124 ntBASIC5.55□□□□□ -1.52
SSX4O60224 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX4O60224 AC073488.9-201ENST00000631601 754 ntBASIC5.55□□□□□ -1.52
SSX4O60224 AL163152.1-201ENST00000642001 374 ntBASIC5.55□□□□□ -1.52
SSX4O60224 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX4O60224 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX4O60224 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SSX4O60224 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SSX4O60224 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SSX4O60224 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.55□□□□□ -1.52
SSX4O60224 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SSX4O60224 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX4O60224 MAPK10-338ENST00000641647 3362 ntBASIC5.55□□□□□ -1.52
SSX4O60224 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SSX4O60224 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSX4O60224 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SSX4O60224 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSX4O60224 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSX4O60224 AC024651.2-201ENST00000562480 2098 ntBASIC5.54□□□□□ -1.52
SSX4O60224 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX4O60224 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSX4O60224 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX4O60224 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX4O60224 AL358178.1-201ENST00000407698 397 ntBASIC5.54□□□□□ -1.52
SSX4O60224 EEF1B2P8-201ENST00000414101 671 ntBASIC5.54□□□□□ -1.52
SSX4O60224 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.54□□□□□ -1.52
SSX4O60224 AL354766.1-201ENST00000423396 542 ntBASIC5.54□□□□□ -1.52
SSX4O60224 OSTCP4-201ENST00000424397 449 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX4O60224 AC007679.3-201ENST00000434035 414 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC110602.1-201ENST00000437414 318 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.54□□□□□ -1.52
SSX4O60224 EIF5AP4-201ENST00000441206 465 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC017099.1-201ENST00000448261 1028 ntBASIC5.54□□□□□ -1.52
SSX4O60224 MORF4L1P4-201ENST00000450245 976 ntBASIC5.54□□□□□ -1.52
SSX4O60224 RN7SL254P-201ENST00000460609 284 ntBASIC5.54□□□□□ -1.52
SSX4O60224 NDUFA5P5-201ENST00000468361 342 ntBASIC5.54□□□□□ -1.52
SSX4O60224 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX4O60224 RPL12P24-201ENST00000474907 486 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC012123.2-201ENST00000485809 248 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.54□□□□□ -1.52
SSX4O60224 GM2AP2-201ENST00000491764 562 ntBASIC5.54□□□□□ -1.52
SSX4O60224 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX4O60224 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.54□□□□□ -1.52
SSX4O60224 ST13P12-201ENST00000508958 1094 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.54□□□□□ -1.52
SSX4O60224 AC009879.1-201ENST00000520029 839 ntBASIC5.54□□□□□ -1.52
SSX4O60224 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX4O60224 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX4O60224 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.54□□□□□ -1.52
SSX4O60224 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.54□□□□□ -1.52
SSX4O60224 AP000619.2-201ENST00000546014 969 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC023968.1-201ENST00000560719 475 ntBASIC5.54□□□□□ -1.52
SSX4O60224 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms