Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 RN7SKP184-201ENST00000362348 333 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 MIR130A-201ENST00000385274 89 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC019205.1-201ENST00000421830 730 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 FAM183DP-201ENST00000421987 399 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 GAPDHP75-201ENST00000433910 943 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 GAPDHP48-201ENST00000436626 961 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 SERPINA7P1-201ENST00000443077 631 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 SNORD125-201ENST00000459538 96 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC004890.1-201ENST00000461005 181 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AL158068.1-201ENST00000506116 616 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 GUSBP9-201ENST00000510138 584 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 DHFRP1-201ENST00000579682 559 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC015819.1-201ENST00000613588 663 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AL357140.4-201ENST00000636827 412 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 AC093671.1-201ENST00000624981 2929 ntBASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM49D1C9J1S8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AP001029.2-203ENST00000589795 4910 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC005005.4-201ENST00000623789 16698 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC023632.6-201ENST00000624338 2177 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AL121886.1-201ENST00000358609 435 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 SNORA5.1-201ENST00000384275 131 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC005042.1-201ENST00000393397 800 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 YWHAZP6-201ENST00000399764 738 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC016739.1-201ENST00000405359 345 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC108479.1-201ENST00000431142 427 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AL359265.1-201ENST00000440296 795 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 RPL12P49-201ENST00000441100 121 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 LINC02210-201ENST00000444561 288 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 GEMIN2P1-201ENST00000454246 752 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 RPL9P15-201ENST00000491096 532 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 NACAP5-201ENST00000509863 636 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 MT1CP-201ENST00000567054 174 ntBASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM49D1C9J1S8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.71□□□□□ -1.49
TRIM49D1C9J1S8 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM49D1C9J1S8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms