Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 RN7SKP15-201ENST00000364742 309 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 RN7SKP186-201ENST00000365371 303 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 RNU6-167P-201ENST00000384292 106 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 MYL6P5-201ENST00000412707 459 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AC006455.6-201ENST00000426192 893 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 PCBP2P1-201ENST00000437262 977 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AL162739.1-201ENST00000450606 307 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 RNA5SP271-201ENST00000516700 88 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 PCNAP4-201ENST00000532690 730 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AC092121.1-201ENST00000569452 202 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AP005212.4-201ENST00000614206 710 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AP001962.1-201ENST00000624114 559 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 AC138627.1-204ENST00000641894 765 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AC018628.1-201ENST00000624147 3819 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 HSPD1P8-201ENST00000400121 1658 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 MTCO1P8-201ENST00000416914 1523 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AC023490.2-201ENST00000359859 470 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 RN7SKP128-201ENST00000364270 303 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 MIR1203-201ENST00000408812 85 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 RPS3P2-201ENST00000421346 701 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AC099677.3-201ENST00000427081 395 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 BX323845.3-201ENST00000428215 527 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AC013410.1-201ENST00000436223 1232 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AC009963.4-201ENST00000448535 339 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AL122020.1-201ENST00000472287 459 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 SNRPCP3-201ENST00000474888 476 ntBASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.37□□□□□ -1.39
SNX9Q9Y5X1 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC005725.1-201ENST00000577346 2607 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC091305.2-201ENST00000624049 1576 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms