Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AL121839.2-201ENST00000565058 6943 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AC087752.1-201ENST00000391360 558 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AL096800.1-201ENST00000405326 893 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 MIR1203-201ENST00000408812 85 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AL096829.1-201ENST00000413677 457 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 EEF1B2P8-201ENST00000414101 671 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AL035660.1-201ENST00000422041 222 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 CHEK2P5-201ENST00000423877 246 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 PCBP2P1-201ENST00000437262 977 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 RPL36AP39-201ENST00000445859 318 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AP006222.1-205ENST00000450734 457 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 RN7SL352P-201ENST00000466002 277 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AL355032.1-201ENST00000472981 438 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AC093719.1-201ENST00000480427 441 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 SCARNA21.2-201ENST00000516600 166 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AP003080.1-202ENST00000526526 915 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 OR6M2P-201ENST00000529831 871 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AC090286.3-201ENST00000573133 187 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AC027334.1-201ENST00000603257 310 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 MTCO1P11-201ENST00000429111 1528 ntBASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA1Q9UND3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 RNF19BPY-201ENST00000458209 1550 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 TET1P1-201ENST00000426627 2301 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AL451046.1-201ENST00000406097 534 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 SNRPEP6-201ENST00000407465 277 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 RN7SKP229-201ENST00000410465 302 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 RNU4-64P-201ENST00000410795 131 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AC245884.2-201ENST00000426257 404 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 TUBB4BP6-201ENST00000437576 479 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 UBFD1P1-201ENST00000473259 814 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AC114728.1-201ENST00000488289 483 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AC112184.1-201ENST00000505179 312 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AC112191.2-201ENST00000522428 333 ntBASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.51□□□□□ -1.53
NPIPA1Q9UND3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms