Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AL449283.1-201ENST00000602631 3403 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 RN7SKP145-201ENST00000363291 303 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 OR10T1P-201ENST00000424327 947 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 RPS27AP6-201ENST00000427962 448 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 NPM1P18-201ENST00000434232 732 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AL353662.1-201ENST00000439099 327 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC108751.3-201ENST00000461814 1020 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 RPS7P6-201ENST00000485777 579 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC018639.1-201ENST00000492994 442 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 GUSBP9-201ENST00000510138 584 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC137627.1-201ENST00000545761 289 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC091078.2-201ENST00000557145 559 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AP005119.1-201ENST00000580956 292 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC073389.3-201ENST00000609434 935 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC007786.3-201ENST00000615154 596 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AC241377.1-201ENST00000619797 406 ntBASIC5.46□□□□□ -1.54
VAPAQ9P0L0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 PARP4P2-201ENST00000446672 3326 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC009506.2-201ENST00000420635 840 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 GAPDHP48-201ENST00000436626 961 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC064862.5-201ENST00000440618 334 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC004890.1-201ENST00000461005 181 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 ASNSP4-201ENST00000511103 447 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 MT1CP-201ENST00000567054 174 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AL078601.3-201ENST00000573303 535 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC092681.3-201ENST00000609463 678 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC015819.1-201ENST00000613588 663 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AL139099.4-201ENST00000614802 114 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 MIR6133-201ENST00000617057 108 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 FAM27E2-201ENST00000619668 403 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC117409.1-201ENST00000470499 1310 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AP005435.3-201ENST00000531260 3198 ntBASIC5.45□□□□□ -1.54
VAPAQ9P0L0 AC007938.2-201ENST00000604666 2634 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AC097063.1-201ENST00000426714 1797 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms