Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 RNA5SP477-201ENST00000362639 119 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 RNU1-136P-201ENST00000384181 164 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AL357752.1-201ENST00000412817 349 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 MRPL53P1-201ENST00000414323 319 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 NDUFS5P5-201ENST00000437256 321 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 OR7E116P-201ENST00000448529 957 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 CTSLP6-201ENST00000458273 1002 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC139365.2-201ENST00000517972 253 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 RPL12P48-201ENST00000605620 304 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC009779.8-202ENST00000607990 932 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AL442128.2-201ENST00000620246 1824 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AL449283.1-201ENST00000602631 3403 ntBASIC5.78□□□□□ -1.48
TREX1Q9NSU2 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 AC004076.2-201ENST00000620532 3323 ntBASIC5.77□□□□□ -1.48
TREX1Q9NSU2 AC012078.1-201ENST00000405035 1646 ntBASIC5.77□□□□□ -1.48
TREX1Q9NSU2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC025470.1-201ENST00000510053 2032 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 Z95114.1-201ENST00000624264 14574 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 MIR130A-201ENST00000385274 89 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC087752.1-201ENST00000391360 558 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 RPS23P9-201ENST00000448848 438 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 RPS17P15-201ENST00000475609 349 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 RN7SL284P-201ENST00000498823 275 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC025458.1-201ENST00000506046 166 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC021146.10-201ENST00000515628 706 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 Y_RNA.667-201ENST00000516212 107 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 RNA5SP438-201ENST00000516561 112 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 HMGN2P36-201ENST00000529541 409 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC096996.1-201ENST00000563813 325 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC015712.7-201ENST00000615211 635 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 AC079776.5-201ENST00000641920 211 ntBASIC5.77□□□□□ -1.49
TREX1Q9NSU2 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.77□□□□□ -1.49
TREX1Q9NSU2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 CAP1P2-201ENST00000417455 1409 ntBASIC5.76□□□□□ -1.49
TREX1Q9NSU2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.76□□□□□ -1.49
TREX1Q9NSU2 RPS7P6-201ENST00000485777 579 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms