Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 RPL11P4-201ENST00000332269 436 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 RPL5P19-201ENST00000404228 893 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AC099535.1-201ENST00000408928 371 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 OSTCP4-201ENST00000424397 449 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AL139158.1-201ENST00000424719 340 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 TIMM8BP2-201ENST00000445940 251 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 RN7SL188P-201ENST00000469842 285 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AL355032.1-201ENST00000472981 438 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 AK4P6-201ENST00000505168 528 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AC113367.2-201ENST00000505749 160 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 HMGN1P16-201ENST00000508308 283 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 FTH1P11-201ENST00000517577 551 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 AC008055.1-201ENST00000547032 609 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 AC090616.1-201ENST00000583895 447 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AL359091.2-201ENST00000609303 556 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 MIR6780B-201ENST00000610307 79 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AL121890.2-201ENST00000617644 465 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AF117829.2-201ENST00000619538 361 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 AL109924.4-201ENST00000623089 670 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 AL596275.2-207ENST00000641188 675 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 OR8A1-204ENST00000642111 1145 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 NEK2P2-201ENST00000438441 1338 ntBASIC5.97□□□□□ -1.45
VMP1Q96GC9 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VMP1Q96GC9 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VMP1Q96GC9 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VMP1Q96GC9 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
VMP1Q96GC9 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
VMP1Q96GC9 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VMP1Q96GC9 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
VMP1Q96GC9 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VMP1Q96GC9 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 RNU6-891P-201ENST00000384280 111 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 AL121835.1-201ENST00000404250 354 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 MTND4LP13-201ENST00000425022 298 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 VN1R20P-201ENST00000425215 966 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VMP1Q96GC9 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 VN1R38P-201ENST00000450265 887 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC011411.1-201ENST00000509592 876 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 IGKV1D-22-201ENST00000518953 324 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC073916.1-201ENST00000545095 130 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 TPRX1P1-201ENST00000557620 319 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC073046.2-201ENST00000604756 527 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 GMCL1P2-201ENST00000605230 823 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC073389.3-201ENST00000609434 935 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VMP1Q96GC9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 AC083843.2-201ENST00000568248 6253 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
VMP1Q96GC9 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.96□□□□□ -1.46
VMP1Q96GC9 CASC19-246ENST00000641625 1606 ntBASIC5.96□□□□□ -1.46
VMP1Q96GC9 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VMP1Q96GC9 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.95□□□□□ -1.46
VMP1Q96GC9 TRIM51GP-201ENST00000534741 1350 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms