Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.4□□□□□ -1.23
SYNE4Q8N205 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE4Q8N205 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.4□□□□□ -1.23
SYNE4Q8N205 AL139805.2-201ENST00000455305 2433 ntBASIC7.4□□□□□ -1.23
SYNE4Q8N205 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE4Q8N205 SALL4P7-201ENST00000555779 3120 ntBASIC7.4□□□□□ -1.23
SYNE4Q8N205 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.4□□□□□ -1.23
SYNE4Q8N205 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE4Q8N205 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.4□□□□□ -1.23
SYNE4Q8N205 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
SYNE4Q8N205 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.4□□□□□ -1.23
SYNE4Q8N205 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
SYNE4Q8N205 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE4Q8N205 AC016583.1-201ENST00000624221 2431 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE4Q8N205 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 RNU6-171P-201ENST00000384354 107 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 RNU4-34P-201ENST00000410431 124 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 PTMAP6-201ENST00000439110 327 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 LRRC37A14P-201ENST00000452297 462 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 AC073581.1-201ENST00000519036 575 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 EIF4A2P5-201ENST00000529914 499 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 AC007494.1-201ENST00000562293 760 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 GARSP1-201ENST00000570895 719 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 AC017076.1-201ENST00000607613 578 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 AP005212.4-201ENST00000614206 710 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE4Q8N205 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE4Q8N205 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE4Q8N205 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SYNE4Q8N205 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 MRE11P1-201ENST00000464884 2127 ntBASIC7.39□□□□□ -1.23
SYNE4Q8N205 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SYNE4Q8N205 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 MTHFD2P5-201ENST00000320415 844 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 CFL1P1-202ENST00000432948 411 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 OR13K1P-201ENST00000444577 975 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 PFN1P6-201ENST00000476786 399 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 RN7SL165P-201ENST00000477476 291 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC068522.1-201ENST00000482895 345 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 RN7SL184P-201ENST00000488308 297 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 NENFP3-201ENST00000503735 313 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC067852.5-201ENST00000589299 310 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC027334.1-201ENST00000603257 310 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC068313.1-201ENST00000604028 1008 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC004908.3-201ENST00000610248 625 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC097520.1-201ENST00000624435 385 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 C4BPAP1-201ENST00000415474 1893 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SYNE4Q8N205 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 AC009831.5-201ENST00000624000 3189 ntBASIC7.38□□□□□ -1.23
SYNE4Q8N205 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SYNE4Q8N205 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms