Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC112518.2-201ENST00000508565 425 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC021451.1-201ENST00000523498 1129 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AP003066.2-201ENST00000529375 555 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC004923.2-201ENST00000529649 369 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AP000619.2-201ENST00000546014 969 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC090651.1-201ENST00000567865 634 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 RN7SL208P-201ENST00000577964 296 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 MIR4420-201ENST00000583944 77 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC069431.2-201ENST00000604149 1099 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 SNORD96A-201ENST00000606577 79 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC112503.1-201ENST00000608436 391 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC116667.2-201ENST00000641075 823 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 HSPD1P14-201ENST00000432666 1618 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 RPL31P11-201ENST00000426558 1558 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 RNA5SP355-201ENST00000365317 135 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 GNG5P2-201ENST00000372054 207 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AF228730.1-201ENST00000397972 663 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 SSR1P2-201ENST00000415208 787 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 HYALP1-201ENST00000417674 1279 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 MRPS21P5-201ENST00000417885 231 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AHCYP8-201ENST00000425108 209 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 RPS7P4-201ENST00000444127 582 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 SEPT7P3-201ENST00000455017 621 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 RPL7AP30-201ENST00000482859 796 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 RPS3AP15-201ENST00000483874 781 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC105233.1-201ENST00000498840 781 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC106800.3-201ENST00000511389 308 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 SCARNA5-201ENST00000516201 276 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AGGF1P5-201ENST00000567900 919 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC006120.1-201ENST00000579375 546 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 FCGR1CP-201ENST00000579737 1127 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AL021368.3-201ENST00000607119 578 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC012511.1-201ENST00000608140 449 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AL137000.1-201ENST00000610528 1244 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC007671.1-201ENST00000616957 830 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AP000484.1-201ENST00000620067 1252 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC117503.3-201ENST00000623811 601 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms