Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC004890.3-201ENST00000605566 1095 ntBASIC7.08□□□□□ -1.28
CTR9Q6PD62 U1.25-201ENST00000614085 162 ntBASIC7.08□□□□□ -1.28
CTR9Q6PD62 AP005431.1-201ENST00000618479 319 ntBASIC7.08□□□□□ -1.28
CTR9Q6PD62 U1.34-201ENST00000618578 162 ntBASIC7.08□□□□□ -1.28
CTR9Q6PD62 U1.31-201ENST00000620022 160 ntBASIC7.08□□□□□ -1.28
CTR9Q6PD62 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.08□□□□□ -1.28
CTR9Q6PD62 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTR9Q6PD62 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
CTR9Q6PD62 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CTR9Q6PD62 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CTR9Q6PD62 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CTR9Q6PD62 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTR9Q6PD62 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTR9Q6PD62 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTR9Q6PD62 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTR9Q6PD62 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTR9Q6PD62 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 RPL5P2-201ENST00000429598 854 ntBASIC7.07□□□□□ -1.28
CTR9Q6PD62 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 AP006222.1-205ENST00000450734 457 ntBASIC7.07□□□□□ -1.28
CTR9Q6PD62 AC124945.1-201ENST00000485133 188 ntBASIC7.07□□□□□ -1.28
CTR9Q6PD62 SNORA70.11-201ENST00000515987 138 ntBASIC7.07□□□□□ -1.28
CTR9Q6PD62 SNORA70.13-201ENST00000516116 138 ntBASIC7.07□□□□□ -1.28
CTR9Q6PD62 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTR9Q6PD62 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTR9Q6PD62 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.07□□□□□ -1.28
CTR9Q6PD62 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTR9Q6PD62 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTR9Q6PD62 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTR9Q6PD62 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 MIR133A2-201ENST00000347538 102 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 RNA5SP510-201ENST00000364697 99 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 AC016739.1-201ENST00000405359 345 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTR9Q6PD62 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 AL731534.1-201ENST00000434711 269 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 RPL23AP19-201ENST00000436229 369 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 RPS12P17-201ENST00000438591 377 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 AL162739.1-201ENST00000450606 307 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 ACA64.4-201ENST00000459070 127 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 KATNBL1P4-201ENST00000503545 918 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTR9Q6PD62 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTR9Q6PD62 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 MIR132-201ENST00000591554 101 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 AL049840.6-201ENST00000604583 345 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CTR9Q6PD62 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.06□□□□□ -1.28
CTR9Q6PD62 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CTR9Q6PD62 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.06□□□□□ -1.28
CTR9Q6PD62 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CTR9Q6PD62 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTR9Q6PD62 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CTR9Q6PD62 RNA5SP211-201ENST00000365516 117 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CTR9Q6PD62 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CTR9Q6PD62 MYL6P5-201ENST00000412707 459 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 RPS4XP5-201ENST00000419038 768 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 AC099677.3-201ENST00000427081 395 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 AC016027.5-201ENST00000427227 210 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 MTND6P12-201ENST00000428247 522 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 AC007998.1-201ENST00000474156 672 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 AL035690.1-201ENST00000490892 383 ntBASIC7.05□□□□□ -1.28
CTR9Q6PD62 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.05□□□□□ -1.28
CTR9Q6PD62 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.05□□□□□ -1.28
CTR9Q6PD62 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.05□□□□□ -1.28
CTR9Q6PD62 OOSP1P2-201ENST00000579644 351 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms