Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC007159.1-201ENST00000566529 4706 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC125336.1-201ENST00000508893 2827 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 HSPD1P8-201ENST00000400121 1658 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 HSPD1P7-201ENST00000447985 1686 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 OR51C1P-202ENST00000641159 1444 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC093297.3-201ENST00000607056 2517 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 MIR137-201ENST00000385223 102 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AL360271.1-201ENST00000395679 510 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 RN7SKP216-201ENST00000411050 312 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 MTND2P11-201ENST00000423638 648 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 ETF1P1-206ENST00000427296 984 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC108479.1-201ENST00000431142 427 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AL356390.1-201ENST00000455684 397 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 RN7SL413P-201ENST00000482700 297 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC008410.1-201ENST00000483777 339 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC091965.3-201ENST00000506236 208 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 SNORA74.1-201ENST00000516320 180 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 SNORA70.17-201ENST00000516449 133 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AP003080.1-202ENST00000526526 915 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 OR4A42P-201ENST00000531397 938 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AL121579.2-201ENST00000555466 590 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC090826.1-203ENST00000569235 490 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC020923.1-201ENST00000624021 917 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC099654.6-201ENST00000636487 512 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AKAP17BP-201ENST00000431706 2719 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 AC011369.2-201ENST00000624423 1567 ntBASIC5.25□□□□□ -1.57
PDLIM3Q53GG5 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 MTCO1P15-201ENST00000529569 1526 ntBASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 SNORA79B-201ENST00000410557 148 ntBASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 VN1R20P-201ENST00000425215 966 ntBASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 OR13K1P-201ENST00000444577 975 ntBASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AC073109.1-201ENST00000445066 978 ntBASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 NPM1P27-201ENST00000502784 830 ntBASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AL390198.2-201ENST00000510553 222 ntBASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AC027544.3-201ENST00000535082 757 ntBASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.24□□□□□ -1.57
PDLIM3Q53GG5 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms