Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 AL591848.4-201ENST00000567832 3472 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AC011592.1-201ENST00000624647 3634 ntBASIC6.64□□□□□ -1.35
YBX1P67809 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
YBX1P67809 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.64□□□□□ -1.35
YBX1P67809 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.64□□□□□ -1.35
YBX1P67809 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.64□□□□□ -1.35
YBX1P67809 Z68694.1-201ENST00000413929 841 ntBASIC6.64□□□□□ -1.35
YBX1P67809 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.64□□□□□ -1.35
YBX1P67809 RPL36P18-201ENST00000419316 318 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.64□□□□□ -1.35
YBX1P67809 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC6.64□□□□□ -1.35
YBX1P67809 ELOCP8-201ENST00000439309 332 ntBASIC6.64□□□□□ -1.35
YBX1P67809 ELOCP15-201ENST00000442090 332 ntBASIC6.64□□□□□ -1.35
YBX1P67809 MTND5P2-201ENST00000442927 1142 ntBASIC6.64□□□□□ -1.35
YBX1P67809 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.64□□□□□ -1.35
YBX1P67809 TAF9P1-201ENST00000445421 515 ntBASIC6.64□□□□□ -1.35
YBX1P67809 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.64□□□□□ -1.35
YBX1P67809 TAF9P2-201ENST00000454958 515 ntBASIC6.64□□□□□ -1.35
YBX1P67809 CEACAMP11-201ENST00000455211 583 ntBASIC6.64□□□□□ -1.35
YBX1P67809 NDUFA5P5-201ENST00000468361 342 ntBASIC6.64□□□□□ -1.35
YBX1P67809 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
YBX1P67809 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 RN7SL849P-201ENST00000485236 295 ntBASIC6.64□□□□□ -1.35
YBX1P67809 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.64□□□□□ -1.35
YBX1P67809 AC096754.1-201ENST00000508904 818 ntBASIC6.64□□□□□ -1.35
YBX1P67809 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.64□□□□□ -1.35
YBX1P67809 AC114940.1-201ENST00000512162 1265 ntBASIC6.64□□□□□ -1.35
YBX1P67809 SCARNA11.1-201ENST00000516918 132 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.64□□□□□ -1.35
YBX1P67809 AP000662.1-201ENST00000530952 487 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.64□□□□□ -1.35
YBX1P67809 AP000916.1-201ENST00000533869 835 ntBASIC6.64□□□□□ -1.35
YBX1P67809 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.64□□□□□ -1.35
YBX1P67809 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.64□□□□□ -1.35
YBX1P67809 AC104229.1-201ENST00000561364 255 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AC234778.2-201ENST00000566241 354 ntBASIC6.64□□□□□ -1.35
YBX1P67809 CTSLP2-201ENST00000580501 394 ntBASIC6.64□□□□□ -1.35
YBX1P67809 RN7SL32P-201ENST00000580514 281 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.64□□□□□ -1.35
YBX1P67809 AC020914.7-201ENST00000594477 545 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.64□□□□□ -1.35
YBX1P67809 RPS27AP19-201ENST00000597285 458 ntBASIC6.64□□□□□ -1.35
YBX1P67809 MTND3P19-201ENST00000603825 345 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AP003973.1-201ENST00000604639 691 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AC024589.2-201ENST00000605642 1294 ntBASIC6.64□□□□□ -1.35
YBX1P67809 AL031601.1-201ENST00000605702 394 ntBASIC6.64□□□□□ -1.35
YBX1P67809 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.64□□□□□ -1.35
YBX1P67809 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.64□□□□□ -1.35
YBX1P67809 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.64□□□□□ -1.35
YBX1P67809 AC131009.3-201ENST00000621809 287 ntBASIC6.64□□□□□ -1.35
YBX1P67809 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.64□□□□□ -1.35
YBX1P67809 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.64□□□□□ -1.35
YBX1P67809 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
YBX1P67809 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
YBX1P67809 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
YBX1P67809 HSPD1P1-201ENST00000503199 1726 ntBASIC6.64□□□□□ -1.35
YBX1P67809 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
YBX1P67809 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.64□□□□□ -1.35
YBX1P67809 AC011504.1-201ENST00000623331 4103 ntBASIC6.64□□□□□ -1.35
YBX1P67809 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 DLEU2L-201ENST00000371086 3555 ntBASIC6.63□□□□□ -1.35
YBX1P67809 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 RNU5B-1-201ENST00000363286 116 ntBASIC6.63□□□□□ -1.35
YBX1P67809 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
YBX1P67809 Y_RNA.472-201ENST00000384322 102 ntBASIC6.63□□□□□ -1.35
YBX1P67809 RNU6-796P-201ENST00000391086 107 ntBASIC6.63□□□□□ -1.35
YBX1P67809 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
YBX1P67809 AL034417.1-201ENST00000399343 800 ntBASIC6.63□□□□□ -1.35
YBX1P67809 HSPD1P16-201ENST00000402302 394 ntBASIC6.63□□□□□ -1.35
YBX1P67809 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
YBX1P67809 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.63□□□□□ -1.35
YBX1P67809 AL512353.3-201ENST00000417517 1326 ntBASIC6.63□□□□□ -1.35
YBX1P67809 RPL12P43-201ENST00000420608 499 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AL133325.1-201ENST00000421090 382 ntBASIC6.63□□□□□ -1.35
YBX1P67809 NEK2P4-201ENST00000425793 1329 ntBASIC6.63□□□□□ -1.35
YBX1P67809 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms