Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU6-152P-201ENST00000384037 107 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
RHBDL3P58872 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.22□□□□□ -1.25
RHBDL3P58872 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AL451136.1-201ENST00000435399 325 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AL161636.2-201ENST00000445179 927 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.22□□□□□ -1.25
RHBDL3P58872 HGF-207ENST00000453018 721 ntTSL 3 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AC018638.3-201ENST00000461273 132 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 AC114728.1-201ENST00000488289 483 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AC108157.1-201ENST00000510511 539 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 RNA5SP116-201ENST00000516132 98 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.22□□□□□ -1.25
RHBDL3P58872 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.22□□□□□ -1.25
RHBDL3P58872 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
RHBDL3P58872 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.22□□□□□ -1.25
RHBDL3P58872 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AC020916.2-201ENST00000591242 360 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 COX6CP7-201ENST00000597056 208 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.22□□□□□ -1.25
RHBDL3P58872 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.22□□□□□ -1.25
RHBDL3P58872 AC024589.2-201ENST00000605642 1294 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.22□□□□□ -1.25
RHBDL3P58872 TCL6_3.1-201ENST00000619064 137 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 MIR6886-201ENST00000619864 61 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 AL162233.1-201ENST00000620014 944 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 AC004808.2-201ENST00000627965 773 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.22□□□□□ -1.25
RHBDL3P58872 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
RHBDL3P58872 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.22□□□□□ -1.25
RHBDL3P58872 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 MSL3P1-202ENST00000440028 1468 ntBASIC7.22□□□□□ -1.25
RHBDL3P58872 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RHBDL3P58872 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.21□□□□□ -1.25
RHBDL3P58872 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.21□□□□□ -1.25
RHBDL3P58872 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RHBDL3P58872 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RHBDL3P58872 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RHBDL3P58872 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
RHBDL3P58872 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RHBDL3P58872 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.21□□□□□ -1.26
RHBDL3P58872 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.21□□□□□ -1.26
RHBDL3P58872 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
RHBDL3P58872 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RHBDL3P58872 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RHBDL3P58872 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RHBDL3P58872 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RHBDL3P58872 TMSB4XP4-201ENST00000323496 618 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 RNA5SP333-201ENST00000363466 118 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 RNA5SP334-201ENST00000364825 118 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 RN7SKP161-201ENST00000411110 305 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.21□□□□□ -1.26
RHBDL3P58872 BMS1P10-201ENST00000443754 1120 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RHBDL3P58872 AC103563.5-201ENST00000455643 364 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 AC023245.1-201ENST00000468501 517 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 AL122020.1-201ENST00000472287 459 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 RN7SL174P-201ENST00000475578 289 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 AC068522.1-201ENST00000482895 345 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 AC106872.4-201ENST00000510050 523 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 PCNAP4-201ENST00000532690 730 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.21□□□□□ -1.26
RHBDL3P58872 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.21□□□□□ -1.26
RHBDL3P58872 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.21□□□□□ -1.26
RHBDL3P58872 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.21□□□□□ -1.26
RHBDL3P58872 AC009237.12-201ENST00000604755 742 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 FAM72A-208ENST00000607379 1139 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.21□□□□□ -1.26
RHBDL3P58872 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.21□□□□□ -1.26
RHBDL3P58872 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RHBDL3P58872 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
RHBDL3P58872 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RHBDL3P58872 AL391261.1-201ENST00000555712 1479 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.21□□□□□ -1.26
RHBDL3P58872 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RHBDL3P58872 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.21□□□□□ -1.26
RHBDL3P58872 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
RHBDL3P58872 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
RHBDL3P58872 AC015689.2-201ENST00000528172 1738 ntBASIC7.21□□□□□ -1.26
RHBDL3P58872 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RHBDL3P58872 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RHBDL3P58872 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.2□□□□□ -1.26
RHBDL3P58872 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RHBDL3P58872 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms