Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CASP4P49662 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.32□□□□□ -1.4
CASP4P49662 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
CASP4P49662 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CASP4P49662 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CASP4P49662 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.31□□□□□ -1.4
CASP4P49662 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.31□□□□□ -1.4
CASP4P49662 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 RAB5CP1-201ENST00000395972 580 ntBASIC6.31□□□□□ -1.4
CASP4P49662 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.31□□□□□ -1.4
CASP4P49662 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.31□□□□□ -1.4
CASP4P49662 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 RNU1-88P-201ENST00000459274 128 ntBASIC6.31□□□□□ -1.4
CASP4P49662 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 AC099521.1-201ENST00000482557 334 ntBASIC6.31□□□□□ -1.4
CASP4P49662 GAPDHP71-201ENST00000511530 1003 ntBASIC6.31□□□□□ -1.4
CASP4P49662 LDHBP3-201ENST00000514909 822 ntBASIC6.31□□□□□ -1.4
CASP4P49662 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 AC096996.1-201ENST00000563813 325 ntBASIC6.31□□□□□ -1.4
CASP4P49662 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.31□□□□□ -1.4
CASP4P49662 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.31□□□□□ -1.4
CASP4P49662 AC092121.1-201ENST00000569452 202 ntBASIC6.31□□□□□ -1.4
CASP4P49662 AC060780.2-201ENST00000589047 198 ntBASIC6.31□□□□□ -1.4
CASP4P49662 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 AP005431.1-201ENST00000618479 319 ntBASIC6.31□□□□□ -1.4
CASP4P49662 MIR1910-201ENST00000636955 80 ntBASIC6.31□□□□□ -1.4
CASP4P49662 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.31□□□□□ -1.4
CASP4P49662 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.31□□□□□ -1.4
CASP4P49662 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.31□□□□□ -1.4
CASP4P49662 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.31□□□□□ -1.4
CASP4P49662 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.31□□□□□ -1.4
CASP4P49662 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CASP4P49662 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CASP4P49662 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CASP4P49662 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.3□□□□□ -1.4
CASP4P49662 MIR621-201ENST00000384919 96 ntBASIC6.3□□□□□ -1.4
CASP4P49662 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.3□□□□□ -1.4
CASP4P49662 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.3□□□□□ -1.4
CASP4P49662 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.3□□□□□ -1.4
CASP4P49662 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.3□□□□□ -1.4
CASP4P49662 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.3□□□□□ -1.4
CASP4P49662 EIF5AP4-201ENST00000441206 465 ntBASIC6.3□□□□□ -1.4
CASP4P49662 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.3□□□□□ -1.4
CASP4P49662 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.3□□□□□ -1.4
CASP4P49662 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 ACA64.1-201ENST00000459171 127 ntBASIC6.3□□□□□ -1.4
CASP4P49662 RPSAP37-201ENST00000470913 821 ntBASIC6.3□□□□□ -1.4
CASP4P49662 UBFD1P1-201ENST00000473259 814 ntBASIC6.3□□□□□ -1.4
CASP4P49662 AC093719.1-201ENST00000480427 441 ntBASIC6.3□□□□□ -1.4
CASP4P49662 HMGN2P36-201ENST00000529541 409 ntBASIC6.3□□□□□ -1.4
CASP4P49662 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CASP4P49662 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.3□□□□□ -1.4
CASP4P49662 AP001357.1-201ENST00000586304 1053 ntBASIC6.3□□□□□ -1.4
CASP4P49662 FAM27E4-201ENST00000605259 342 ntBASIC6.3□□□□□ -1.4
CASP4P49662 AL034374.2-201ENST00000605281 548 ntBASIC6.3□□□□□ -1.4
CASP4P49662 AC129778.1-202ENST00000623812 261 ntBASIC6.3□□□□□ -1.4
CASP4P49662 AL591379.1-207ENST00000635982 261 ntBASIC6.3□□□□□ -1.4
CASP4P49662 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.3□□□□□ -1.4
CASP4P49662 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CASP4P49662 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CASP4P49662 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CASP4P49662 NCOA4P2-201ENST00000340589 1813 ntBASIC6.29□□□□□ -1.4
CASP4P49662 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CASP4P49662 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CASP4P49662 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CASP4P49662 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CASP4P49662 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CASP4P49662 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.29□□□□□ -1.4
CASP4P49662 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CASP4P49662 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CASP4P49662 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.29□□□□□ -1.4
CASP4P49662 AC021876.1-201ENST00000425959 359 ntBASIC6.29□□□□□ -1.4
CASP4P49662 AC242426.1-201ENST00000435270 960 ntBASIC6.29□□□□□ -1.4
CASP4P49662 LDHAP2-201ENST00000437325 985 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms