Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC099521.1-201ENST00000482557 334 ntBASIC5.65□□□□□ -1.5
CLDN9O95484 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN9O95484 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.65□□□□□ -1.5
CLDN9O95484 IGKV3D-25-201ENST00000519599 235 ntBASIC5.65□□□□□ -1.5
CLDN9O95484 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN9O95484 AP003396.4-201ENST00000527574 265 ntBASIC5.65□□□□□ -1.5
CLDN9O95484 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN9O95484 AC126615.2-201ENST00000553003 515 ntBASIC5.65□□□□□ -1.5
CLDN9O95484 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN9O95484 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.65□□□□□ -1.5
CLDN9O95484 MIR3154-201ENST00000577829 84 ntBASIC5.65□□□□□ -1.5
CLDN9O95484 OOSP1P2-201ENST00000579644 351 ntBASIC5.65□□□□□ -1.5
CLDN9O95484 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN9O95484 AC245014.3-201ENST00000618589 347 ntBASIC5.65□□□□□ -1.5
CLDN9O95484 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN9O95484 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN9O95484 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN9O95484 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CLDN9O95484 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN9O95484 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN9O95484 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN9O95484 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CLDN9O95484 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN9O95484 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN9O95484 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN9O95484 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN9O95484 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN9O95484 MFSD8-239ENST00000641590 2479 ntBASIC5.65□□□□□ -1.51
CLDN9O95484 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN9O95484 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN9O95484 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CLDN9O95484 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN9O95484 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLDN9O95484 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 RN7SKP279-201ENST00000411383 298 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN9O95484 VN1R21P-201ENST00000426703 765 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN9O95484 DEFA9P-201ENST00000433042 285 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN9O95484 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN9O95484 AC093166.3-201ENST00000448785 303 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 AC004129.2-201ENST00000457229 287 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 AC090589.1-201ENST00000473109 362 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN9O95484 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN9O95484 HSD3BP3-201ENST00000514706 994 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 RNA5SP473-201ENST00000516402 125 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 IGKV2-19-201ENST00000518132 283 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN9O95484 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN9O95484 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.64□□□□□ -1.51
CLDN9O95484 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN9O95484 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN9O95484 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN9O95484 AC090236.2-201ENST00000587933 1101 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN9O95484 AC016252.1-201ENST00000609721 474 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 MIR6809-201ENST00000612189 116 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 AL683826.1-201ENST00000624104 627 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN9O95484 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
CLDN9O95484 BCORP1-203ENST00000513194 5093 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN9O95484 AC093225.1-201ENST00000506867 1408 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CLDN9O95484 AC104966.1-201ENST00000467010 1464 ntBASIC5.64□□□□□ -1.51
CLDN9O95484 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN9O95484 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN9O95484 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN9O95484 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN9O95484 AC083837.1-201ENST00000565297 2994 ntBASIC5.63□□□□□ -1.51
CLDN9O95484 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN9O95484 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN9O95484 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.63□□□□□ -1.51
CLDN9O95484 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN9O95484 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.63□□□□□ -1.51
CLDN9O95484 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CLDN9O95484 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.63□□□□□ -1.51
CLDN9O95484 ATP5LP2-201ENST00000440646 311 ntBASIC5.63□□□□□ -1.51
CLDN9O95484 AC019084.1-201ENST00000457337 432 ntBASIC5.63□□□□□ -1.51
CLDN9O95484 AC023194.2-201ENST00000465398 406 ntBASIC5.63□□□□□ -1.51
CLDN9O95484 AL157777.1-201ENST00000468100 304 ntBASIC5.63□□□□□ -1.51
CLDN9O95484 RPL37P23-201ENST00000492641 294 ntBASIC5.63□□□□□ -1.51
CLDN9O95484 KATNBL1P4-201ENST00000503545 918 ntBASIC5.63□□□□□ -1.51
CLDN9O95484 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.63□□□□□ -1.51
CLDN9O95484 RN7SKP238-201ENST00000516483 249 ntBASIC5.63□□□□□ -1.51
CLDN9O95484 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.63□□□□□ -1.51
CLDN9O95484 AC136777.2-201ENST00000522979 358 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms