Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX3O60493 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX3O60493 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.68□□□□□ -1.5
SNX3O60493 OR4F13P-202ENST00000560066 2054 ntBASIC5.68□□□□□ -1.5
SNX3O60493 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX3O60493 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX3O60493 AC027279.1-201ENST00000568885 4284 ntBASIC5.68□□□□□ -1.5
SNX3O60493 AC137056.2-201ENST00000624055 1958 ntBASIC5.67□□□□□ -1.5
SNX3O60493 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX3O60493 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SNX3O60493 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX3O60493 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX3O60493 AC006600.2-201ENST00000624834 2506 ntBASIC5.67□□□□□ -1.5
SNX3O60493 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX3O60493 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX3O60493 RNA5SP326-201ENST00000363209 110 ntBASIC5.67□□□□□ -1.5
SNX3O60493 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX3O60493 AC003045.1-201ENST00000398779 713 ntBASIC5.67□□□□□ -1.5
SNX3O60493 FTH1P26-201ENST00000406512 701 ntBASIC5.67□□□□□ -1.5
SNX3O60493 RNA5SP156-201ENST00000410250 110 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX3O60493 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX3O60493 AL445928.1-201ENST00000435545 222 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC097523.2-201ENST00000435551 652 ntBASIC5.67□□□□□ -1.5
SNX3O60493 CR391992.1-201ENST00000438601 394 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SNX3O60493 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX3O60493 MEMO1P4-201ENST00000453590 386 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX3O60493 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX3O60493 AC135999.1-201ENST00000478962 479 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AL079303.1-201ENST00000486611 463 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC098799.1-201ENST00000504752 800 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC097460.2-201ENST00000511857 741 ntBASIC5.67□□□□□ -1.5
SNX3O60493 RNU6-1334P-201ENST00000516032 105 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX3O60493 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX3O60493 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX3O60493 AC025423.2-201ENST00000537570 439 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX3O60493 VDAC2P2-201ENST00000544463 901 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC139697.1-201ENST00000548429 745 ntBASIC5.67□□□□□ -1.5
SNX3O60493 DPPA3P2-202ENST00000557188 1219 ntBASIC5.67□□□□□ -1.5
SNX3O60493 MRPS21P8-201ENST00000569196 235 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC006120.1-201ENST00000579375 546 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.67□□□□□ -1.5
SNX3O60493 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX3O60493 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AL645933.2-201ENST00000606743 1207 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC009283.1-201ENST00000615852 645 ntBASIC5.67□□□□□ -1.5
SNX3O60493 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX3O60493 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX3O60493 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX3O60493 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX3O60493 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX3O60493 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX3O60493 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX3O60493 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SNX3O60493 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX3O60493 AC079097.1-201ENST00000512187 1399 ntBASIC5.67□□□□□ -1.5
SNX3O60493 CASC19-246ENST00000641625 1606 ntBASIC5.66□□□□□ -1.5
SNX3O60493 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.66□□□□□ -1.5
SNX3O60493 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 AL022311.1-201ENST00000623726 19416 ntBASIC5.66□□□□□ -1.5
SNX3O60493 AL603750.1-201ENST00000624216 1717 ntBASIC5.66□□□□□ -1.5
SNX3O60493 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX3O60493 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX3O60493 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
SNX3O60493 AC005042.1-201ENST00000393397 800 ntBASIC5.66□□□□□ -1.5
SNX3O60493 MIR1231-201ENST00000408101 92 ntBASIC5.66□□□□□ -1.5
SNX3O60493 RNU2-5P-201ENST00000410533 180 ntBASIC5.66□□□□□ -1.5
SNX3O60493 RN7SKP38-201ENST00000410782 309 ntBASIC5.66□□□□□ -1.5
SNX3O60493 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX3O60493 RPL12P10-201ENST00000413498 498 ntBASIC5.66□□□□□ -1.5
SNX3O60493 RPS7P8-201ENST00000418311 581 ntBASIC5.66□□□□□ -1.5
SNX3O60493 RPL35AP31-201ENST00000418340 337 ntBASIC5.66□□□□□ -1.5
SNX3O60493 RPS4XP5-201ENST00000419038 768 ntBASIC5.66□□□□□ -1.5
SNX3O60493 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX3O60493 RPSAP65-201ENST00000429660 595 ntBASIC5.66□□□□□ -1.5
SNX3O60493 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX3O60493 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX3O60493 CXCR2P1-202ENST00000443392 1074 ntBASIC5.66□□□□□ -1.5
SNX3O60493 RSL24D1P2-201ENST00000445584 366 ntBASIC5.66□□□□□ -1.5
SNX3O60493 OR52I1-201ENST00000450052 1050 ntBASIC5.66□□□□□ -1.5
SNX3O60493 OR52E3P-201ENST00000452083 936 ntBASIC5.66□□□□□ -1.5
SNX3O60493 OR52Y1P-201ENST00000452418 828 ntBASIC5.66□□□□□ -1.5
SNX3O60493 COX6B1P2-201ENST00000489624 230 ntBASIC5.66□□□□□ -1.5
SNX3O60493 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 AC096661.1-201ENST00000515870 822 ntBASIC5.66□□□□□ -1.5
SNX3O60493 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX3O60493 KCTD9P6-201ENST00000522306 950 ntBASIC5.66□□□□□ -1.5
SNX3O60493 RBMS2P1-201ENST00000525031 1226 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms