Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC114781.3-201ENST00000512083 142 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 RNA5SP271-201ENST00000516700 88 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 IGKV3D-34-201ENST00000522638 302 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 AC027026.1-201ENST00000532323 742 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 MIR3614-201ENST00000581261 86 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 AC073869.7-201ENST00000640874 297 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 AC020633.1-201ENST00000468439 2247 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 ZNF101P1-201ENST00000435701 1720 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 AC015689.2-201ENST00000528172 1738 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 AC116158.1-201ENST00000560231 2129 ntBASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
NPIPA2E9PIF3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC097063.1-201ENST00000426714 1797 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AL121839.2-201ENST00000565058 6943 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC024587.1-201ENST00000505925 2157 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC011416.1-201ENST00000514947 1732 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 TMSB4XP2-201ENST00000335179 210 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 RNA5SP273-201ENST00000362484 113 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 NPM1P37-201ENST00000403105 874 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 RNA5SP251-201ENST00000410614 137 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 ZNF619P1-201ENST00000446539 752 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC005077.1-201ENST00000449226 375 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 RAB28P2-201ENST00000454299 641 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AL022319.1-201ENST00000458183 1167 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 MTATP6P1-201ENST00000514057 681 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 RNA5SP438-201ENST00000516561 112 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC090236.2-201ENST00000587933 1101 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC008555.7-201ENST00000605008 583 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AL645933.2-201ENST00000606743 1207 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC108673.3-201ENST00000609183 335 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 HDAC1P2-201ENST00000453661 1398 ntBASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.52□□□□□ -1.53
NPIPA2E9PIF3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPIPA2E9PIF3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms