Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MIR188-201ENST00000385034 86 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPL5P2-201ENST00000429598 854 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC138761.5-201ENST00000433967 325 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC00328-2P-201ENST00000436585 219 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RN7SL552P-201ENST00000462094 276 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC007688.1-201ENST00000475592 759 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR7E22P-201ENST00000478335 1035 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR7E157P-201ENST00000494376 911 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR7E99P-201ENST00000505750 922 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC084824.2-201ENST00000548906 345 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RN7SL66P-201ENST00000582099 264 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC245128.3-201ENST00000594721 748 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC091167.5-201ENST00000605689 894 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RNA5SP439-201ENST00000617595 124 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC007204.1-201ENST00000621794 555 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC005618.4-201ENST00000625053 554 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC010325.3-201ENST00000641084 394 ntBASIC5.35□□□□□ -1.55
TRBV4-1A0A0J9YWV2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 NLRP3P1-201ENST00000622303 1785 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RN7SKP185-201ENST00000362813 326 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RN7SKP257-201ENST00000364525 309 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPL35AP3-201ENST00000414680 288 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPL7AP14-201ENST00000424041 802 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MTND2P40-201ENST00000436718 841 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC015983.1-201ENST00000441577 373 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL445466.1-201ENST00000448432 357 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC099670.1-201ENST00000455141 783 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RPS7P10-201ENST00000464254 603 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RN7SL269P-201ENST00000467795 305 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 TRBV8-1-201ENST00000481590 279 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 RNU6-943P-201ENST00000516960 98 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC009962.1-201ENST00000567327 3813 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OOSP1P2-201ENST00000579644 351 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 WBP1LP12-201ENST00000604449 331 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC012676.3-201ENST00000614983 479 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 MIR6823-201ENST00000622118 61 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 OR11H2-202ENST00000641517 1085 ntBASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV4-1A0A0J9YWV2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms