Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC126615.2-201ENST00000553003 515 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC016252.1-201ENST00000609721 474 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AL355488.2-201ENST00000609909 2850 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 AC119674.1-202ENST00000641333 1860 ntBASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDD3Q9Y3P4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RHBDD3Q9Y3P4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
RHBDD3Q9Y3P4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.21□□□□□ -1.57
RHBDD3Q9Y3P4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.21□□□□□ -1.57
RHBDD3Q9Y3P4 AC009962.1-201ENST00000567327 3813 ntBASIC5.21□□□□□ -1.57
RHBDD3Q9Y3P4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RHBDD3Q9Y3P4 AC138907.8-201ENST00000623981 2256 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AL034546.1-201ENST00000623740 3693 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 NPM1P37-201ENST00000403105 874 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 SNORA81-201ENST00000408493 178 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 PTP4A1P1-201ENST00000420539 515 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 RPS15AP30-201ENST00000420976 390 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC092865.3-201ENST00000425390 1026 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC007383.1-201ENST00000445875 636 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 RPL23AP40-201ENST00000487630 390 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AP002453.1-201ENST00000492327 668 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 RN7SL284P-201ENST00000498823 275 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC106822.1-201ENST00000502647 526 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 CCDC11P1-201ENST00000503137 1162 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 RFPL4AP3-201ENST00000515267 345 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 RNA5SP441-201ENST00000516809 88 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC004232.2-201ENST00000574245 821 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC011500.1-201ENST00000601963 469 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AL451049.1-201ENST00000608672 497 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AL080312.2-201ENST00000613001 630 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 uc_338.29-201ENST00000615099 168 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC022400.9-201ENST00000623633 273 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 MTCO1P15-201ENST00000529569 1526 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 AC130304.1-201ENST00000622942 2385 ntBASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDD3Q9Y3P4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AC027575.3-201ENST00000583058 2747 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms