Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 AC092070.2-203ENST00000598377 3644 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 BCORP1-203ENST00000513194 5093 ntBASIC5.57□□□□□ -1.52
VPS29Q9UBQ0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AC027088.4-201ENST00000611559 1947 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 COX6B1P3-201ENST00000312310 260 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 MIR1275-201ENST00000408770 80 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 MEMO1P4-201ENST00000453590 386 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 RPL9P15-201ENST00000491096 532 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AC092349.1-201ENST00000504903 310 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 SCARNA18.1-201ENST00000516330 83 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AC008507.3-201ENST00000585753 472 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 MIR6793-201ENST00000612376 63 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 MIR6806-201ENST00000622141 64 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 AC011933.2-201ENST00000578539 2790 ntBASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
VPS29Q9UBQ0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC015799.1-201ENST00000622996 3122 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC242426.1-201ENST00000435270 960 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AL590399.4-201ENST00000436561 601 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 VN1R110P-201ENST00000438988 971 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 RPL5P10-201ENST00000445207 894 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC068228.1-201ENST00000461723 211 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AL122020.1-201ENST00000472287 459 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC122718.2-201ENST00000505325 591 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 LDHAP1-201ENST00000509421 992 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC084824.2-201ENST00000548906 345 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC002310.3-201ENST00000569728 723 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AL359091.2-201ENST00000609303 556 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC079776.5-201ENST00000641920 211 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC139426.3-201ENST00000605648 2059 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AP000432.2-201ENST00000624164 2048 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AF287957.1-201ENST00000607368 1595 ntBASIC5.55□□□□□ -1.52
VPS29Q9UBQ0 AC232271.1-201ENST00000602455 2715 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms