Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC120036.2-201ENST00000509729 1474 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 RPL7AP51-201ENST00000422016 760 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC092865.3-201ENST00000425390 1026 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 CYCSP51-201ENST00000443545 318 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 RN7SL197P-201ENST00000466981 299 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AP002453.1-201ENST00000492327 668 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AL034374.2-201ENST00000605281 548 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 NANOGP3-201ENST00000605855 286 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AL035661.1-201ENST00000620459 1144 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC073488.6-201ENST00000632293 754 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 AC015689.2-201ENST00000528172 1738 ntBASIC5.48□□□□□ -1.53
VAPAQ9P0L0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VAPAQ9P0L0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AL096711.1-201ENST00000404780 554 ntBASIC5.47□□□□□ -1.53
VAPAQ9P0L0 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC099782.1-201ENST00000425889 474 ntBASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.47□□□□□ -1.53
VAPAQ9P0L0 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC023271.1-201ENST00000445936 1090 ntBASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC007346.1-201ENST00000569208 867 ntBASIC5.47□□□□□ -1.53
VAPAQ9P0L0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC008627.1-201ENST00000517511 1704 ntBASIC5.47□□□□□ -1.53
VAPAQ9P0L0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.47□□□□□ -1.53
VAPAQ9P0L0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.47□□□□□ -1.53
VAPAQ9P0L0 AC016745.2-201ENST00000608834 3443 ntBASIC5.46□□□□□ -1.53
VAPAQ9P0L0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
VAPAQ9P0L0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
VAPAQ9P0L0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VAPAQ9P0L0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
VAPAQ9P0L0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms