Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 PARP4P2-201ENST00000446672 3326 ntBASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AC004386.1-201ENST00000393214 761 ntBASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AC023141.8-201ENST00000442554 208 ntBASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 SETP21-201ENST00000514799 892 ntBASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 HNRNPCP1-201ENST00000556181 766 ntBASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AL158152.1-201ENST00000602652 1435 ntBASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCSER1Q9C0I3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 MIR1282-201ENST00000408865 101 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 RPS10P18-201ENST00000442662 495 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC144530.1-201ENST00000452862 555 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 RPL12P39-201ENST00000455456 496 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 RNU1-88P-201ENST00000459274 128 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AL122020.1-201ENST00000472287 459 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC128716.1-201ENST00000475129 166 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC025458.1-201ENST00000506046 166 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC079905.1-201ENST00000549280 475 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC006530.1-201ENST00000555980 571 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 NDUFA5P11-201ENST00000567995 343 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC005726.4-201ENST00000582858 458 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AL513327.3-201ENST00000602618 469 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC021422.1-201ENST00000621212 473 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 AC130360.2-201ENST00000533477 1556 ntBASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCSER1Q9C0I3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 RNA5SP273-201ENST00000362484 113 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 RN7SKP15-201ENST00000364742 309 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 RPL7P58-201ENST00000402913 758 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 AC002069.1-201ENST00000429649 1159 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 DEFA9P-201ENST00000433042 285 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 DNAJA1P5-201ENST00000440278 943 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 AL359839.1-201ENST00000451975 1160 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 GAPDHP71-201ENST00000511530 1003 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms