Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RN7SL221P-201ENST00000466190 281 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 RN7SL369P-201ENST00000477138 299 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 RN7SL714P-201ENST00000487050 298 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 MTND3P3-201ENST00000505004 126 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 RN7SKP35-201ENST00000517210 151 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 RPA2P3-201ENST00000533268 770 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 AL512506.1-201ENST00000613918 449 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 RFPL4AP6-201ENST00000616792 846 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 AC074276.2-201ENST00000619891 348 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 AC006453.5-201ENST00000636451 619 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 CR382285.2-201ENST00000624662 1495 ntBASIC7.43□□□□□ -1.22
CHMP4CQ96CF2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 SNORA70.9-201ENST00000384370 135 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 RNU6-316P-201ENST00000391027 107 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 RPL7P58-201ENST00000402913 758 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AL451046.1-201ENST00000406097 534 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 TRIM60P17-201ENST00000415181 719 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 RPL23AP18-201ENST00000416139 468 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC007562.1-201ENST00000421819 517 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 RNF19BPX-201ENST00000426224 625 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 RPS7P14-201ENST00000426405 583 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AL645936.1-201ENST00000441979 518 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC023274.2-201ENST00000445264 521 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC010240.2-201ENST00000445363 1205 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC092967.1-201ENST00000449016 481 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 KHDC1P1-201ENST00000511053 508 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 CYP4F27P-201ENST00000514557 494 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC006512.2-201ENST00000543250 486 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC090651.1-201ENST00000567865 634 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC098483.2-201ENST00000603158 454 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AL021368.3-201ENST00000607119 578 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC144521.1-201ENST00000607148 956 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC006924.1-201ENST00000610750 559 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC018659.2-201ENST00000624690 715 ntBASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CHMP4CQ96CF2 AL137141.1-201ENST00000624622 4836 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC020656.2-201ENST00000613291 5309 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 MIR365B-201ENST00000362317 111 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 RN7SKP108-201ENST00000411367 328 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 RPL7AP14-201ENST00000424041 802 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 KCTD9P1-201ENST00000430462 1167 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AL590399.4-201ENST00000436561 601 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC074367.1-201ENST00000438685 1125 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 EMC3-AS1-205ENST00000438698 534 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 VN1R48P-201ENST00000448149 1036 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 PCNAP1-201ENST00000505363 709 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC108157.1-201ENST00000510511 539 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms