Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL050305.1-201ENST00000399993 1230 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC4Q92889 AL157884.1-201ENST00000424561 454 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 AC022080.2-201ENST00000452932 533 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC4Q92889 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
ERCC4Q92889 MARK2P8-201ENST00000476069 952 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC4Q92889 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC4Q92889 AC093870.1-201ENST00000506837 213 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC4Q92889 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC4Q92889 RNU6-334P-201ENST00000517072 102 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
ERCC4Q92889 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC4Q92889 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.11□□□□□ -1.27
ERCC4Q92889 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC4Q92889 ZKSCAN7P1-201ENST00000543668 673 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 AC009120.3-201ENST00000563335 499 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 OR4C49P-201ENST00000563891 900 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC4Q92889 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.11□□□□□ -1.27
ERCC4Q92889 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.11□□□□□ -1.27
ERCC4Q92889 AL589863.1-201ENST00000595383 631 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 AC004805.3-201ENST00000603178 310 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 AC114477.1-201ENST00000605097 605 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 RPL12P48-201ENST00000605620 304 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC7.11□□□□□ -1.27
ERCC4Q92889 AC099654.15-201ENST00000639802 509 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.11□□□□□ -1.27
ERCC4Q92889 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC7.11□□□□□ -1.27
ERCC4Q92889 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ERCC4Q92889 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
ERCC4Q92889 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
ERCC4Q92889 AC004656.1-201ENST00000568479 4951 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 AL592429.1-201ENST00000403909 1473 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 AL442128.2-201ENST00000620246 1824 ntBASIC7.11□□□□□ -1.27
ERCC4Q92889 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC4Q92889 RBPJP6-201ENST00000411556 1431 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC4Q92889 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC4Q92889 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC4Q92889 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
ERCC4Q92889 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
ERCC4Q92889 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC4Q92889 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC4Q92889 RNU6-650P-201ENST00000365658 111 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 AC092634.1-201ENST00000366505 199 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC013268.2-201ENST00000420753 337 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 MTCO2P23-201ENST00000425216 680 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 RPS26P41-201ENST00000450370 284 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC073594.1-201ENST00000462065 364 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC093663.2-201ENST00000484625 313 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 AC009567.2-201ENST00000502989 349 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 AC018645.1-201ENST00000505003 109 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AP001496.3-201ENST00000580230 913 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC025811.1-201ENST00000604312 472 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC025016.1-201ENST00000616746 682 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 AL445528.2-201ENST00000620582 470 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC4Q92889 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC4Q92889 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
ERCC4Q92889 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.1□□□□□ -1.27
ERCC4Q92889 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ERCC4Q92889 AC125238.2-201ENST00000430003 1440 ntBASIC7.1□□□□□ -1.27
ERCC4Q92889 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms