Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.37□□□□□ -1.39
HDAC4P56524 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC4P56524 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC4P56524 AC122718.2-201ENST00000505325 591 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 AC091874.2-201ENST00000505889 720 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 AC018797.1-201ENST00000510791 255 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 CYP4F27P-201ENST00000514557 494 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC4P56524 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.37□□□□□ -1.39
HDAC4P56524 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC4P56524 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.37□□□□□ -1.39
HDAC4P56524 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC4P56524 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.37□□□□□ -1.39
HDAC4P56524 AC010547.7-201ENST00000570323 333 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.37□□□□□ -1.39
HDAC4P56524 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC4P56524 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC4P56524 GLYATL1P2-202ENST00000588046 902 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC4P56524 AC092944.2-201ENST00000605443 889 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 BNIP3P7-201ENST00000605641 516 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 AC012467.1-201ENST00000607740 256 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC4P56524 AC241377.1-201ENST00000619797 406 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC4P56524 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC4P56524 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
HDAC4P56524 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC4P56524 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
HDAC4P56524 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
HDAC4P56524 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.36□□□□□ -1.39
HDAC4P56524 AC097063.1-201ENST00000426714 1797 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 ZNF101P1-201ENST00000435701 1720 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDAC4P56524 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HDAC4P56524 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.36□□□□□ -1.39
HDAC4P56524 AC005725.1-201ENST00000577346 2607 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDAC4P56524 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HDAC4P56524 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
HDAC4P56524 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.36□□□□□ -1.39
HDAC4P56524 AL929601.4-201ENST00000613011 1341 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 Z95114.1-201ENST00000624264 14574 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.36□□□□□ -1.39
HDAC4P56524 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.36□□□□□ -1.39
HDAC4P56524 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
HDAC4P56524 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.36□□□□□ -1.39
HDAC4P56524 OR7E25P-201ENST00000344844 931 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 AC083799.1-201ENST00000366451 910 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 RBBP4P5-201ENST00000398583 1266 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 PEX12P1-201ENST00000400284 1048 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 AL589994.1-201ENST00000404962 340 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HDAC4P56524 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.36□□□□□ -1.39
HDAC4P56524 AC019070.1-201ENST00000415008 1024 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 MTND4LP21-201ENST00000415303 295 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 PTCD2P2-201ENST00000415579 1095 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 AC021876.1-201ENST00000425959 359 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 AC016027.5-201ENST00000427227 210 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 EIF5AP4-201ENST00000441206 465 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.36□□□□□ -1.39
HDAC4P56524 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 AC017099.1-201ENST00000448261 1028 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 RPL23AP60-201ENST00000450011 454 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 AC002553.3-201ENST00000453002 341 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.36□□□□□ -1.39
HDAC4P56524 AP002453.1-201ENST00000492327 668 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 PFN1P8-201ENST00000497012 543 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.36□□□□□ -1.39
HDAC4P56524 AC108103.1-201ENST00000511286 446 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 CR383658.1-201ENST00000514609 734 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.36□□□□□ -1.39
HDAC4P56524 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.36□□□□□ -1.39
HDAC4P56524 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.36□□□□□ -1.39
HDAC4P56524 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.36□□□□□ -1.39
HDAC4P56524 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.36□□□□□ -1.39
HDAC4P56524 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.36□□□□□ -1.39
HDAC4P56524 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDAC4P56524 AC004890.3-201ENST00000605566 1095 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 RFPL4AP6-201ENST00000616792 846 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 AL512652.1-201ENST00000619006 500 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.36□□□□□ -1.39
HDAC4P56524 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.36□□□□□ -1.39
HDAC4P56524 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDAC4P56524 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HDAC4P56524 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
HDAC4P56524 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HDAC4P56524 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDAC4P56524 AC079753.1-201ENST00000623243 3868 ntBASIC6.36□□□□□ -1.39
HDAC4P56524 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDAC4P56524 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.36□□□□□ -1.39
HDAC4P56524 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms