Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC013442.1-201ENST00000397347 228 ntBASIC10.13□□□□□ -0.79
SMARCA2P51531 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC10.13□□□□□ -0.79
SMARCA2P51531 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC10.13□□□□□ -0.79
SMARCA2P51531 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC10.13□□□□□ -0.79
SMARCA2P51531 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC10.13□□□□□ -0.79
SMARCA2P51531 RN7SKP288-201ENST00000516227 268 ntBASIC10.13□□□□□ -0.79
SMARCA2P51531 AC079075.1-201ENST00000559543 878 ntBASIC10.13□□□□□ -0.79
SMARCA2P51531 AC106730.2-201ENST00000566641 540 ntBASIC10.13□□□□□ -0.79
SMARCA2P51531 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC10.13□□□□□ -0.79
SMARCA2P51531 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC10.13□□□□□ -0.79
SMARCA2P51531 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
SMARCA2P51531 MFSD8-216ENST00000641147 4009 ntBASIC10.13□□□□□ -0.79
SMARCA2P51531 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA2P51531 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA2P51531 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA2P51531 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC10.13□□□□□ -0.79
SMARCA2P51531 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
SMARCA2P51531 AP000866.6-201ENST00000638898 3579 ntBASIC10.13□□□□□ -0.79
SMARCA2P51531 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
SMARCA2P51531 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SMARCA2P51531 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SMARCA2P51531 MITF-203ENST00000328528 4680 ntTSL 5 BASIC10.12□□□□□ -0.79
SMARCA2P51531 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC10.12□□□□□ -0.79
SMARCA2P51531 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SMARCA2P51531 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SMARCA2P51531 RBMY2QP-201ENST00000429799 1147 ntBASIC10.12□□□□□ -0.79
SMARCA2P51531 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC10.12□□□□□ -0.79
SMARCA2P51531 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC10.12□□□□□ -0.79
SMARCA2P51531 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SMARCA2P51531 AC078878.1-201ENST00000539832 958 ntBASIC10.12□□□□□ -0.79
SMARCA2P51531 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC10.12□□□□□ -0.79
SMARCA2P51531 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC10.12□□□□□ -0.79
SMARCA2P51531 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC10.12□□□□□ -0.79
SMARCA2P51531 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC10.12□□□□□ -0.79
SMARCA2P51531 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA2P51531 AC009831.5-201ENST00000624000 3189 ntBASIC10.11□□□□□ -0.79
SMARCA2P51531 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA2P51531 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC10.11□□□□□ -0.79
SMARCA2P51531 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SMARCA2P51531 ZNF101P1-201ENST00000435701 1720 ntBASIC10.11□□□□□ -0.79
SMARCA2P51531 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA2P51531 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC10.11□□□□□ -0.79
SMARCA2P51531 AC079922.1-201ENST00000443291 359 ntBASIC10.11□□□□□ -0.79
SMARCA2P51531 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC10.11□□□□□ -0.79
SMARCA2P51531 RPS3AP41-201ENST00000462701 778 ntBASIC10.11□□□□□ -0.79
SMARCA2P51531 AC015864.1-201ENST00000496512 544 ntBASIC10.11□□□□□ -0.79
SMARCA2P51531 OR5AZ1P-201ENST00000527448 943 ntBASIC10.11□□□□□ -0.79
SMARCA2P51531 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC10.11□□□□□ -0.79
SMARCA2P51531 MIR4480-201ENST00000582492 71 ntBASIC10.11□□□□□ -0.79
SMARCA2P51531 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC10.11□□□□□ -0.79
SMARCA2P51531 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC10.11□□□□□ -0.79
SMARCA2P51531 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SMARCA2P51531 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA2P51531 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SMARCA2P51531 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA2P51531 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA2P51531 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA2P51531 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC10.11□□□□□ -0.79
SMARCA2P51531 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA2P51531 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA2P51531 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA2P51531 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA2P51531 MRRF-207ENST00000373729 870 ntTSL 3 BASIC10.1□□□□□ -0.79
SMARCA2P51531 RNU6ATAC7P-201ENST00000408111 127 ntBASIC10.1□□□□□ -0.79
SMARCA2P51531 AC011742.2-201ENST00000443818 352 ntBASIC10.1□□□□□ -0.79
SMARCA2P51531 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC10.1□□□□□ -0.79
SMARCA2P51531 AL603882.1-201ENST00000463059 681 ntBASIC10.1□□□□□ -0.79
SMARCA2P51531 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC10.1□□□□□ -0.79
SMARCA2P51531 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC10.1□□□□□ -0.79
SMARCA2P51531 MIR132-201ENST00000591554 101 ntBASIC10.1□□□□□ -0.79
SMARCA2P51531 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC10.1□□□□□ -0.79
SMARCA2P51531 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC10.1□□□□□ -0.79
SMARCA2P51531 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SMARCA2P51531 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA2P51531 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA2P51531 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SMARCA2P51531 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA2P51531 AL034549.2-201ENST00000618285 3373 ntBASIC10.1□□□□□ -0.79
SMARCA2P51531 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SMARCA2P51531 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SMARCA2P51531 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA2P51531 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SMARCA2P51531 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
SMARCA2P51531 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC10.09□□□□□ -0.79
SMARCA2P51531 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC10.09□□□□□ -0.79
SMARCA2P51531 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC10.09□□□□□ -0.79
SMARCA2P51531 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC10.09□□□□□ -0.79
SMARCA2P51531 AC011497.2-201ENST00000600255 639 ntBASIC10.09□□□□□ -0.79
SMARCA2P51531 AC069307.1-201ENST00000602820 447 ntBASIC10.09□□□□□ -0.79
SMARCA2P51531 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA2P51531 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA2P51531 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA2P51531 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SMARCA2P51531 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC10.09□□□□□ -0.79
SMARCA2P51531 MFSD8-219ENST00000641228 2559 ntBASIC10.09□□□□□ -0.79
SMARCA2P51531 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA2P51531 AC112243.1-201ENST00000623949 3851 ntBASIC10.09□□□□□ -0.79
SMARCA2P51531 AL662795.2-201ENST00000624252 3706 ntBASIC10.09□□□□□ -0.79
SMARCA2P51531 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA2P51531 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms