Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC113412.1-201ENST00000425840 504 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXA1P49639 OR52S1P-201ENST00000427016 937 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 ETF1P1-206ENST00000427296 984 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA1P49639 AL158053.1-201ENST00000441503 453 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 RPS7P4-201ENST00000444127 582 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXA1P49639 AL929410.2-201ENST00000451170 189 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA1P49639 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXA1P49639 CBX5P1-201ENST00000468470 561 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 AC010409.2-201ENST00000505780 478 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXA1P49639 AC134698.1-201ENST00000511619 643 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA1P49639 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXA1P49639 RNA5SP400-201ENST00000517155 111 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 OR8Q1P-201ENST00000526467 655 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 AC103855.4-201ENST00000533158 265 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA1P49639 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXA1P49639 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 AC106785.3-201ENST00000564064 847 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 GLYATL1P2-202ENST00000588046 902 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 AC127071.2-201ENST00000623293 527 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA1P49639 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA1P49639 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 AC004076.2-201ENST00000620532 3323 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 AC092376.2-201ENST00000622621 4116 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 AL929601.4-201ENST00000613011 1341 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA1P49639 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA1P49639 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA1P49639 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXA1P49639 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA1P49639 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA1P49639 DDX6P1-205ENST00000441966 1436 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXA1P49639 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA1P49639 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXA1P49639 AC114774.1-201ENST00000507410 1770 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA1P49639 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA1P49639 LYARP1-201ENST00000436977 1501 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
HOXA1P49639 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HOXA1P49639 AC107977.1-201ENST00000355745 939 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 RNA5SP152-201ENST00000365184 110 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXA1P49639 AL117344.1-201ENST00000407196 616 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 PTGES3P2-201ENST00000407942 482 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXA1P49639 RANP6-201ENST00000413691 644 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA1P49639 MTND4LP21-201ENST00000415303 295 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA1P49639 CYP4F30P-202ENST00000420048 405 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA1P49639 AL354692.1-201ENST00000423044 315 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AC017019.1-201ENST00000426129 261 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 NPM1P22-201ENST00000427761 952 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AC073508.1-201ENST00000428866 656 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 ELOCP6-201ENST00000429066 328 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA1P49639 GAPDHP33-201ENST00000443168 1013 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AL022237.1-201ENST00000446663 358 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 UBBP5-201ENST00000446970 266 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AC092967.1-201ENST00000449016 481 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.14□□□□□ -1.59
HOXA1P49639 ELOCP12-201ENST00000458706 328 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AC092905.1-201ENST00000467527 949 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AF305872.1-201ENST00000485217 471 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 RN7SL37P-201ENST00000490461 307 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 RPL5P14-201ENST00000494197 878 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA1P49639 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA1P49639 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA1P49639 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA1P49639 AL671862.1-201ENST00000515851 349 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 RNA5SP75-201ENST00000516841 111 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA1P49639 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA1P49639 OR8A2P-201ENST00000528631 952 ntBASIC5.14□□□□□ -1.59
HOXA1P49639 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA1P49639 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.14□□□□□ -1.59
HOXA1P49639 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA1P49639 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms