Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.77□□□□□ -1.32
COL4A5P29400 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.77□□□□□ -1.32
COL4A5P29400 AC011497.2-201ENST00000600255 639 ntBASIC6.77□□□□□ -1.32
COL4A5P29400 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.77□□□□□ -1.32
COL4A5P29400 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL4A5P29400 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL4A5P29400 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
COL4A5P29400 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
COL4A5P29400 ZNF101P1-201ENST00000435701 1720 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.77□□□□□ -1.33
COL4A5P29400 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COL4A5P29400 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
COL4A5P29400 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.77□□□□□ -1.33
COL4A5P29400 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 AC002090.1-201ENST00000625000 2138 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.77□□□□□ -1.33
COL4A5P29400 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COL4A5P29400 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL4A5P29400 RNU4-4P-201ENST00000364588 130 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL4A5P29400 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 RN7SKP151-201ENST00000410230 316 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.77□□□□□ -1.33
COL4A5P29400 AC096775.1-201ENST00000437724 448 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 AC009220.1-201ENST00000451614 275 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 RPS3AP41-201ENST00000462701 778 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 AL672167.3-201ENST00000465951 960 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 SNRPCP2-201ENST00000504370 475 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.77□□□□□ -1.33
COL4A5P29400 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL4A5P29400 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.77□□□□□ -1.33
COL4A5P29400 AC104785.1-201ENST00000603220 588 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 AC087385.3-201ENST00000620477 187 ntBASIC6.77□□□□□ -1.33
COL4A5P29400 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.77□□□□□ -1.33
COL4A5P29400 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL4A5P29400 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL4A5P29400 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
COL4A5P29400 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A5P29400 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A5P29400 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A5P29400 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A5P29400 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A5P29400 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A5P29400 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A5P29400 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A5P29400 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A5P29400 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A5P29400 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A5P29400 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.76□□□□□ -1.33
COL4A5P29400 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A5P29400 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL4A5P29400 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A5P29400 RPS11P7-201ENST00000442125 465 ntBASIC6.76□□□□□ -1.33
COL4A5P29400 AC068522.1-201ENST00000482895 345 ntBASIC6.76□□□□□ -1.33
COL4A5P29400 ABCA11P-202ENST00000504019 2110 ntBASIC6.76□□□□□ -1.33
COL4A5P29400 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.76□□□□□ -1.33
COL4A5P29400 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A5P29400 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.76□□□□□ -1.33
COL4A5P29400 AC013701.1-201ENST00000522657 465 ntBASIC6.76□□□□□ -1.33
COL4A5P29400 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.76□□□□□ -1.33
COL4A5P29400 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A5P29400 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL4A5P29400 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A5P29400 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A5P29400 MIR7703-201ENST00000620784 77 ntBASIC6.76□□□□□ -1.33
COL4A5P29400 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A5P29400 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
COL4A5P29400 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A5P29400 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL4A5P29400 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A5P29400 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A5P29400 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
COL4A5P29400 XIST-206ENST00000434839 2865 ntTSL 5 BASIC6.75□□□□□ -1.33
COL4A5P29400 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.75□□□□□ -1.33
COL4A5P29400 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A5P29400 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A5P29400 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A5P29400 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A5P29400 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A5P29400 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A5P29400 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC6.75□□□□□ -1.33
COL4A5P29400 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.75□□□□□ -1.33
COL4A5P29400 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A5P29400 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.75□□□□□ -1.33
COL4A5P29400 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.75□□□□□ -1.33
COL4A5P29400 AC109462.1-201ENST00000491087 368 ntBASIC6.75□□□□□ -1.33
COL4A5P29400 RN7SL447P-201ENST00000494711 245 ntBASIC6.75□□□□□ -1.33
COL4A5P29400 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms