Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFSF4P23510 GAPDHP20-201ENST00000444107 1007 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 CEACAMP5-201ENST00000448037 961 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 DUXAP8-207ENST00000456786 622 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 RN7SL372P-201ENST00000461982 298 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFSF4P23510 AC122714.1-201ENST00000502510 459 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 AC093890.1-201ENST00000502554 540 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TNFSF4P23510 AC010460.2-201ENST00000509054 677 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
TNFSF4P23510 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFSF4P23510 MINOS1P4-201ENST00000515470 318 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 AC093878.1-201ENST00000515630 432 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFSF4P23510 IGKV2D-10-201ENST00000520194 281 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 SNRPCP6-201ENST00000528310 210 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.79□□□□□ -1.48
TNFSF4P23510 AC092375.1-201ENST00000550410 637 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.79□□□□□ -1.48
TNFSF4P23510 AL121594.4-201ENST00000556211 1196 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 AL109628.1-201ENST00000556877 366 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFSF4P23510 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFSF4P23510 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.79□□□□□ -1.48
TNFSF4P23510 SNORA70D-201ENST00000578836 135 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.79□□□□□ -1.48
TNFSF4P23510 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.79□□□□□ -1.48
TNFSF4P23510 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFSF4P23510 VN1R87P-201ENST00000596706 487 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFSF4P23510 AC096586.1-201ENST00000610267 561 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 DUXAP10-204ENST00000612052 616 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFSF4P23510 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFSF4P23510 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNFSF4P23510 ZNF806-201ENST00000438300 1774 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNFSF4P23510 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNFSF4P23510 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.79□□□□□ -1.48
TNFSF4P23510 AC096921.2-201ENST00000561507 1916 ntBASIC5.79□□□□□ -1.48
TNFSF4P23510 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.79□□□□□ -1.48
TNFSF4P23510 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.79□□□□□ -1.48
TNFSF4P23510 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TNFSF4P23510 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNFSF4P23510 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC5.79□□□□□ -1.48
TNFSF4P23510 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFSF4P23510 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.79□□□□□ -1.48
TNFSF4P23510 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNFSF4P23510 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNFSF4P23510 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.78□□□□□ -1.48
TNFSF4P23510 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNFSF4P23510 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFSF4P23510 DDX18P4-201ENST00000511690 1966 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNFSF4P23510 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.78□□□□□ -1.48
TNFSF4P23510 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFSF4P23510 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TNFSF4P23510 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFSF4P23510 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFSF4P23510 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.78□□□□□ -1.48
TNFSF4P23510 SEC63P2-201ENST00000503863 1939 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.78□□□□□ -1.48
TNFSF4P23510 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFSF4P23510 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TNFSF4P23510 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TNFSF4P23510 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFSF4P23510 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFSF4P23510 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFSF4P23510 RPL12P13-201ENST00000310055 497 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 RNU5B-1-201ENST00000363286 116 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 RNA5SP382-201ENST00000363355 112 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
TNFSF4P23510 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNFSF4P23510 U6.112-201ENST00000384129 70 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 DNAJC19P6-201ENST00000401853 280 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 RN7SKP91-201ENST00000410852 288 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 RN7SKP205-201ENST00000410999 307 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 LIPT1P1-201ENST00000415870 1186 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFSF4P23510 EIF4A1P2-201ENST00000422633 1220 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 AC095038.1-201ENST00000429248 1591 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFSF4P23510 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFSF4P23510 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFSF4P23510 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFSF4P23510 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFSF4P23510 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 AL451063.1-201ENST00000450164 1133 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.78□□□□□ -1.48
TNFSF4P23510 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFSF4P23510 AC022431.1-201ENST00000450941 438 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFSF4P23510 AC022080.2-201ENST00000452932 533 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFSF4P23510 AC110749.1-201ENST00000462007 357 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 RPS4XP17-201ENST00000479057 754 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 RN7SL350P-201ENST00000492591 299 ntBASIC5.78□□□□□ -1.48
TNFSF4P23510 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms