Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
RFX1P22670 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
RFX1P22670 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
RFX1P22670 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.07□□□□□ -1.12
RFX1P22670 CREM-216ENST00000429130 1476 ntTSL 5 BASIC8.07□□□□□ -1.12
RFX1P22670 UG0898H09-202ENST00000623646 7040 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AC087045.3-201ENST00000623046 2468 ntBASIC8.07□□□□□ -1.12
RFX1P22670 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.07□□□□□ -1.12
RFX1P22670 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.07□□□□□ -1.12
RFX1P22670 AL158152.1-201ENST00000602652 1435 ntBASIC8.07□□□□□ -1.12
RFX1P22670 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RFX1P22670 Y_RNA.517-201ENST00000384551 106 ntBASIC8.07□□□□□ -1.12
RFX1P22670 RNU6-77P-201ENST00000410554 91 ntBASIC8.07□□□□□ -1.12
RFX1P22670 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC8.07□□□□□ -1.12
RFX1P22670 RNGTTP1-201ENST00000420965 728 ntBASIC8.07□□□□□ -1.12
RFX1P22670 MTCO2P34-201ENST00000421994 607 ntBASIC8.07□□□□□ -1.12
RFX1P22670 RPL7P44-201ENST00000424827 742 ntBASIC8.07□□□□□ -1.12
RFX1P22670 SNX18P3-201ENST00000424993 835 ntBASIC8.07□□□□□ -1.12
RFX1P22670 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.07□□□□□ -1.12
RFX1P22670 RPL7P29-201ENST00000437151 728 ntBASIC8.07□□□□□ -1.12
RFX1P22670 COX6CP2-201ENST00000444980 225 ntBASIC8.07□□□□□ -1.12
RFX1P22670 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 RFC5P1-201ENST00000454419 874 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.07□□□□□ -1.12
RFX1P22670 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC8.07□□□□□ -1.12
RFX1P22670 SSX8-201ENST00000506270 579 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AC024451.1-201ENST00000508013 779 ntBASIC8.07□□□□□ -1.12
RFX1P22670 CBX3P3-201ENST00000508108 532 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AC233724.10-201ENST00000510454 409 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AC010285.3-201ENST00000511668 676 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC8.07□□□□□ -1.12
RFX1P22670 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC8.07□□□□□ -1.12
RFX1P22670 HMGN1P26-201ENST00000558737 303 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AC011260.1-201ENST00000578420 472 ntBASIC8.07□□□□□ -1.12
RFX1P22670 OR4K7P-201ENST00000580232 945 ntBASIC8.07□□□□□ -1.12
RFX1P22670 RN7SL178P-201ENST00000582930 304 ntBASIC8.07□□□□□ -1.12
RFX1P22670 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC8.07□□□□□ -1.12
RFX1P22670 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC8.07□□□□□ -1.12
RFX1P22670 AC005479.3-201ENST00000602790 431 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AC090181.2-201ENST00000602975 672 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC8.07□□□□□ -1.12
RFX1P22670 AC068944.2-201ENST00000610373 403 ntBASIC8.07□□□□□ -1.12
RFX1P22670 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
RFX1P22670 AC009509.4-201ENST00000619202 509 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AL607023.1-201ENST00000620045 248 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AL160394.1-201ENST00000624765 724 ntBASIC8.07□□□□□ -1.12
RFX1P22670 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC8.07□□□□□ -1.12
RFX1P22670 AC243725.1-201ENST00000637164 436 ntBASIC8.07□□□□□ -1.12
RFX1P22670 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.07□□□□□ -1.12
RFX1P22670 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 CASC19-243ENST00000641588 1546 ntBASIC8.07□□□□□ -1.12
RFX1P22670 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC8.07□□□□□ -1.12
RFX1P22670 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.07□□□□□ -1.12
RFX1P22670 AC107021.2-201ENST00000567714 2095 ntBASIC8.07□□□□□ -1.12
RFX1P22670 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 AL357556.1-201ENST00000421884 1388 ntBASIC8.07□□□□□ -1.12
RFX1P22670 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.07□□□□□ -1.12
RFX1P22670 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.07□□□□□ -1.12
RFX1P22670 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
RFX1P22670 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RFX1P22670 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.06□□□□□ -1.12
RFX1P22670 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.06□□□□□ -1.12
RFX1P22670 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RFX1P22670 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RFX1P22670 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 AL672167.1-206ENST00000356293 943 ntBASIC8.06□□□□□ -1.12
RFX1P22670 RNU6-532P-201ENST00000384318 107 ntBASIC8.06□□□□□ -1.12
RFX1P22670 SLC9B1P2-201ENST00000398120 1184 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.06□□□□□ -1.12
RFX1P22670 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RFX1P22670 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 CDY14P-201ENST00000431260 1014 ntBASIC8.06□□□□□ -1.12
RFX1P22670 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 Z74696.2-201ENST00000436514 498 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AC005040.1-201ENST00000437783 482 ntBASIC8.06□□□□□ -1.12
RFX1P22670 MTATP6P13-201ENST00000438531 667 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 CDY23P-201ENST00000451661 1014 ntBASIC8.06□□□□□ -1.12
RFX1P22670 OR52E3P-201ENST00000452083 936 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC8.06□□□□□ -1.12
RFX1P22670 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms