Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC004129.2-201ENST00000457229 287 ntBASIC6.1□□□□□ -1.43
CCDC188H7C350 SNORA74.1-201ENST00000516320 180 ntBASIC6.1□□□□□ -1.43
CCDC188H7C350 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC188H7C350 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC188H7C350 AC023310.2-201ENST00000553844 547 ntBASIC6.1□□□□□ -1.43
CCDC188H7C350 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC188H7C350 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC188H7C350 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC188H7C350 AL078624.2-201ENST00000605063 554 ntBASIC6.1□□□□□ -1.43
CCDC188H7C350 AL390877.1-201ENST00000605704 214 ntBASIC6.1□□□□□ -1.43
CCDC188H7C350 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.1□□□□□ -1.43
CCDC188H7C350 MIR6133-201ENST00000617057 108 ntBASIC6.1□□□□□ -1.43
CCDC188H7C350 AL353684.1-201ENST00000622677 1120 ntBASIC6.1□□□□□ -1.43
CCDC188H7C350 AC002044.3-201ENST00000623314 541 ntBASIC6.1□□□□□ -1.43
CCDC188H7C350 AC123769.1-201ENST00000530992 3192 ntBASIC6.1□□□□□ -1.43
CCDC188H7C350 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC188H7C350 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
CCDC188H7C350 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC188H7C350 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC188H7C350 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
CCDC188H7C350 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC188H7C350 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC188H7C350 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC188H7C350 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC188H7C350 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC188H7C350 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC188H7C350 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CCDC188H7C350 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC188H7C350 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
CCDC188H7C350 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCDC188H7C350 SNORA5.1-201ENST00000384275 131 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 AL035696.2-201ENST00000407941 709 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 MEAF6P1-201ENST00000416092 327 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC188H7C350 RPSAP65-201ENST00000429660 595 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC188H7C350 AC015983.1-201ENST00000441577 373 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC188H7C350 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC188H7C350 RN7SL790P-201ENST00000474043 298 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC188H7C350 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.09□□□□□ -1.43
CCDC188H7C350 AC036111.2-201ENST00000533247 901 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.09□□□□□ -1.43
CCDC188H7C350 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC188H7C350 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC188H7C350 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC188H7C350 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC188H7C350 AP005136.2-201ENST00000583253 1049 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.09□□□□□ -1.43
CCDC188H7C350 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 MIR6883-201ENST00000614952 78 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 AC243960.7-201ENST00000623532 707 ntBASIC6.09□□□□□ -1.43
CCDC188H7C350 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC188H7C350 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC188H7C350 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CCDC188H7C350 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCDC188H7C350 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC188H7C350 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC188H7C350 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC188H7C350 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC188H7C350 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.09□□□□□ -1.44
CCDC188H7C350 GNL2P1-201ENST00000451274 2190 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC188H7C350 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
CCDC188H7C350 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC188H7C350 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC188H7C350 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CCDC188H7C350 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC188H7C350 RNA5SP77-201ENST00000365394 120 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCDC188H7C350 PRELID1P1-201ENST00000403549 660 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 AL132875.1-201ENST00000403623 949 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC188H7C350 AC017078.1-201ENST00000416146 368 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC188H7C350 RPS4XP5-201ENST00000419038 768 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC188H7C350 FTLP8-201ENST00000446770 267 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC188H7C350 SNORD125-201ENST00000459538 96 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC188H7C350 AC015524.1-201ENST00000491585 472 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 EIF4E2P2-201ENST00000492033 736 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 MORF4L2P1-201ENST00000503761 858 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 AC008629.2-201ENST00000503783 483 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms