Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AL034374.2-201ENST00000605281 548 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AL445670.1-201ENST00000618889 801 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AC068213.1-201ENST00000625124 226 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 AL022311.1-201ENST00000623726 19416 ntBASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC28BQ9BUN5 EIF3EP1-201ENST00000433978 1316 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 RNA5SP485-201ENST00000365053 119 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 RNA5SP156-201ENST00000410250 110 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 RPS7P8-201ENST00000418311 581 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC099677.3-201ENST00000427081 395 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 OR6R1P-201ENST00000431838 940 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 RPS10P14-201ENST00000440748 502 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC097359.1-201ENST00000447946 463 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC083795.1-201ENST00000491760 320 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 MIR2117-201ENST00000516780 80 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC037479.1-201ENST00000558361 625 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC091304.5-201ENST00000568969 158 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 MTCO1P7-201ENST00000419523 1542 ntBASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC28BQ9BUN5 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 RBMY1HP-201ENST00000382759 1389 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 RNA5SP85-201ENST00000365378 119 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 MIR188-201ENST00000385034 86 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AL033519.1-201ENST00000407266 307 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 RPL35AP31-201ENST00000418340 337 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 ZNF619P1-201ENST00000446539 752 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 NPM1P9-201ENST00000453156 844 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC006539.1-201ENST00000481419 501 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 RPS26P24-201ENST00000497656 331 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 NPIPB14P-203ENST00000532298 987 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms