Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 GNG5P5-201ENST00000420444 220 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AC002127.1-201ENST00000421305 225 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
FOXA3P55318 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 GTF3AP6-201ENST00000432585 986 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXA3P55318 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXA3P55318 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.34□□□□□ -1.71
FOXA3P55318 RNU1-88P-201ENST00000459274 128 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AC083795.1-201ENST00000491760 320 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 GM2AP2-201ENST00000491764 562 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AC008868.1-201ENST00000509786 737 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXA3P55318 AC021146.10-201ENST00000515628 706 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXA3P55318 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.34□□□□□ -1.71
FOXA3P55318 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXA3P55318 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXA3P55318 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXA3P55318 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXA3P55318 AC099777.1-201ENST00000603779 1070 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 OR51C1P-201ENST00000608504 942 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
FOXA3P55318 AL355480.4-201ENST00000626823 69 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXA3P55318 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXA3P55318 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 SMG1P4-204ENST00000523028 4131 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXA3P55318 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXA3P55318 FANCD2P2-201ENST00000437591 1400 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AC003985.2-201ENST00000562268 1669 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
FOXA3P55318 AC011755.1-201ENST00000623763 2049 ntBASIC4.34□□□□□ -1.71
FOXA3P55318 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
FOXA3P55318 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXA3P55318 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.34□□□□□ -1.72
FOXA3P55318 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
FOXA3P55318 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
FOXA3P55318 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXA3P55318 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
FOXA3P55318 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXA3P55318 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXA3P55318 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXA3P55318 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXA3P55318 RNU1-5P-201ENST00000362684 144 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC003045.1-201ENST00000398779 713 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.33□□□□□ -1.72
FOXA3P55318 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXA3P55318 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 PPIAP23-201ENST00000420099 497 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXA3P55318 OR3D1P-201ENST00000438288 955 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC016027.4-201ENST00000450866 277 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 SLAMF6P1-201ENST00000451067 602 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 RBMY2EP-202ENST00000456360 940 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 AC104164.1-201ENST00000460282 590 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 PSAT1P4-201ENST00000466500 526 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 RPS17P5-201ENST00000498293 408 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 RN7SL104P-201ENST00000498686 293 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC114940.1-201ENST00000512162 1265 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 RN7SKP242-201ENST00000515967 289 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 IGKV1D-32-201ENST00000517449 318 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.33□□□□□ -1.72
FOXA3P55318 NATP-201ENST00000523491 878 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 RBMS2P1-201ENST00000525031 1226 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 AC103855.4-201ENST00000533158 265 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXA3P55318 RPL41P2-201ENST00000544920 409 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC023080.1-201ENST00000551663 931 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
FOXA3P55318 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXA3P55318 AC008507.3-201ENST00000585753 472 ntBASIC4.33□□□□□ -1.72
FOXA3P55318 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms