Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MIR99A-201ENST00000384906 81 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.67□□□□□ -1.5
GTF2A1P52655 AL590635.1-201ENST00000406314 586 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GTF2A1P52655 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.67□□□□□ -1.5
GTF2A1P52655 AL359092.1-201ENST00000417156 265 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 RPL23AP85-201ENST00000421838 433 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 ETF1P1-206ENST00000427296 984 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.67□□□□□ -1.5
GTF2A1P52655 CUBNP2-201ENST00000443534 1139 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
GTF2A1P52655 RPL7L1P1-201ENST00000448259 785 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.67□□□□□ -1.5
GTF2A1P52655 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.67□□□□□ -1.5
GTF2A1P52655 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.67□□□□□ -1.5
GTF2A1P52655 RN7SL352P-201ENST00000466002 277 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 RN7SL37P-201ENST00000490461 307 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
GTF2A1P52655 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC5.67□□□□□ -1.5
GTF2A1P52655 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.67□□□□□ -1.5
GTF2A1P52655 TPM3P3-201ENST00000521343 354 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.67□□□□□ -1.5
GTF2A1P52655 AC124891.1-201ENST00000536322 519 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 MIR4685-201ENST00000578185 69 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 WDR45BP1-201ENST00000583470 1029 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 AC139792.1-201ENST00000607051 647 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 AL008723.3-201ENST00000608926 449 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 AC026333.4-201ENST00000613543 544 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 MRPL57P3-201ENST00000619218 176 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.67□□□□□ -1.5
GTF2A1P52655 AC005858.3-201ENST00000624756 589 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.67□□□□□ -1.5
GTF2A1P52655 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GTF2A1P52655 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.67□□□□□ -1.5
GTF2A1P52655 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
GTF2A1P52655 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.67□□□□□ -1.5
GTF2A1P52655 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GTF2A1P52655 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GTF2A1P52655 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GTF2A1P52655 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.67□□□□□ -1.5
GTF2A1P52655 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
GTF2A1P52655 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.67□□□□□ -1.5
GTF2A1P52655 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GTF2A1P52655 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GTF2A1P52655 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GTF2A1P52655 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.66□□□□□ -1.5
GTF2A1P52655 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
GTF2A1P52655 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
GTF2A1P52655 RNA5SP321-201ENST00000362722 111 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AC007618.1-201ENST00000366455 732 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GTF2A1P52655 LDHAP5-201ENST00000394996 622 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AC121334.1-201ENST00000396414 802 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 RPS24P12-201ENST00000402084 394 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC5.66□□□□□ -1.5
GTF2A1P52655 AL662791.3-201ENST00000413771 776 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AL929472.1-201ENST00000417484 429 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC5.66□□□□□ -1.5
GTF2A1P52655 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5.66□□□□□ -1.5
GTF2A1P52655 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GTF2A1P52655 CRIP1P1-201ENST00000427567 185 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 HSPD1P12-201ENST00000429127 1069 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.66□□□□□ -1.5
GTF2A1P52655 GAPDHP33-201ENST00000443168 1013 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AC073587.1-201ENST00000447093 876 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.66□□□□□ -1.5
GTF2A1P52655 ST13P21-201ENST00000453250 1098 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.66□□□□□ -1.5
GTF2A1P52655 RPS16P9-201ENST00000477220 427 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 RN7SL776P-201ENST00000493390 268 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AC098976.1-201ENST00000513014 541 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.66□□□□□ -1.5
GTF2A1P52655 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.66□□□□□ -1.5
GTF2A1P52655 OR6M2P-201ENST00000529831 871 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.66□□□□□ -1.5
GTF2A1P52655 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.66□□□□□ -1.5
GTF2A1P52655 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.66□□□□□ -1.5
GTF2A1P52655 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.66□□□□□ -1.5
GTF2A1P52655 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.66□□□□□ -1.5
GTF2A1P52655 EXOSC3P2-201ENST00000594464 497 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 AC005753.1-201ENST00000623837 618 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.66□□□□□ -1.5
GTF2A1P52655 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.66□□□□□ -1.5
GTF2A1P52655 AC140479.4-205ENST00000636339 820 ntBASIC5.66□□□□□ -1.5
GTF2A1P52655 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.66□□□□□ -1.5
GTF2A1P52655 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
GTF2A1P52655 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GTF2A1P52655 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GTF2A1P52655 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GTF2A1P52655 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
GTF2A1P52655 OR51C1P-202ENST00000641159 1444 ntBASIC5.65□□□□□ -1.5
GTF2A1P52655 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
GTF2A1P52655 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.65□□□□□ -1.5
GTF2A1P52655 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.65□□□□□ -1.5
GTF2A1P52655 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GTF2A1P52655 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
GTF2A1P52655 AC027228.2-201ENST00000567141 2154 ntBASIC5.65□□□□□ -1.5
GTF2A1P52655 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GTF2A1P52655 AC017079.1-201ENST00000333650 415 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms