Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
HADHAP40939 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HADHAP40939 AC119674.1-202ENST00000641333 1860 ntBASIC6.23□□□□□ -1.41
HADHAP40939 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.23□□□□□ -1.41
HADHAP40939 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HADHAP40939 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.23□□□□□ -1.41
HADHAP40939 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
HADHAP40939 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HADHAP40939 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HADHAP40939 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
HADHAP40939 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.23□□□□□ -1.41
HADHAP40939 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HADHAP40939 MSL3P1-202ENST00000440028 1468 ntBASIC6.22□□□□□ -1.41
HADHAP40939 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HADHAP40939 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HADHAP40939 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HADHAP40939 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.22□□□□□ -1.41
HADHAP40939 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HADHAP40939 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HADHAP40939 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HADHAP40939 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HADHAP40939 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.22□□□□□ -1.41
HADHAP40939 RPL7AP14-201ENST00000424041 802 ntBASIC6.22□□□□□ -1.41
HADHAP40939 AL139158.1-201ENST00000424719 340 ntBASIC6.22□□□□□ -1.41
HADHAP40939 VN1R20P-201ENST00000425215 966 ntBASIC6.22□□□□□ -1.41
HADHAP40939 AC099782.1-201ENST00000425889 474 ntBASIC6.22□□□□□ -1.41
HADHAP40939 HIGD1AP16-201ENST00000450986 258 ntBASIC6.22□□□□□ -1.41
HADHAP40939 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.22□□□□□ -1.41
HADHAP40939 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.22□□□□□ -1.41
HADHAP40939 RAB28P2-201ENST00000454299 641 ntBASIC6.22□□□□□ -1.41
HADHAP40939 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.22□□□□□ -1.41
HADHAP40939 HMGN1P16-201ENST00000508308 283 ntBASIC6.22□□□□□ -1.41
HADHAP40939 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.22□□□□□ -1.41
HADHAP40939 RNA5SP206-201ENST00000516703 121 ntBASIC6.22□□□□□ -1.41
HADHAP40939 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.22□□□□□ -1.41
HADHAP40939 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.22□□□□□ -1.41
HADHAP40939 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.22□□□□□ -1.41
HADHAP40939 BCAS2P1-201ENST00000528022 632 ntBASIC6.22□□□□□ -1.41
HADHAP40939 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.22□□□□□ -1.41
HADHAP40939 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HADHAP40939 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.22□□□□□ -1.41
HADHAP40939 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.22□□□□□ -1.41
HADHAP40939 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.22□□□□□ -1.41
HADHAP40939 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.22□□□□□ -1.41
HADHAP40939 AC016839.1-201ENST00000578162 867 ntBASIC6.22□□□□□ -1.41
HADHAP40939 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.22□□□□□ -1.41
HADHAP40939 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.22□□□□□ -1.41
HADHAP40939 AC004890.3-201ENST00000605566 1095 ntBASIC6.22□□□□□ -1.41
HADHAP40939 AL031658.2-201ENST00000616850 651 ntBASIC6.22□□□□□ -1.41
HADHAP40939 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.22□□□□□ -1.41
HADHAP40939 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
HADHAP40939 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.22□□□□□ -1.41
HADHAP40939 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HADHAP40939 GTF2IP4-201ENST00000453092 2054 ntBASIC6.22□□□□□ -1.41
HADHAP40939 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.22□□□□□ -1.41
HADHAP40939 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
HADHAP40939 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HADHAP40939 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HADHAP40939 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HADHAP40939 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HADHAP40939 AC024651.2-201ENST00000562480 2098 ntBASIC6.21□□□□□ -1.41
HADHAP40939 AP005432.1-201ENST00000580891 3485 ntBASIC6.21□□□□□ -1.42
HADHAP40939 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HADHAP40939 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.21□□□□□ -1.42
HADHAP40939 AC245100.2-201ENST00000454544 1679 ntBASIC6.21□□□□□ -1.42
HADHAP40939 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
HADHAP40939 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HADHAP40939 SNORA43.1-201ENST00000364863 140 ntBASIC6.21□□□□□ -1.42
HADHAP40939 MIR7-1-201ENST00000384871 110 ntBASIC6.21□□□□□ -1.42
HADHAP40939 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HADHAP40939 RNA5SP198-201ENST00000410376 127 ntBASIC6.21□□□□□ -1.42
HADHAP40939 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.21□□□□□ -1.42
HADHAP40939 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HADHAP40939 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.21□□□□□ -1.42
HADHAP40939 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.21□□□□□ -1.42
HADHAP40939 AL365220.1-201ENST00000432923 399 ntBASIC6.21□□□□□ -1.42
HADHAP40939 RPSAP40-201ENST00000442343 891 ntBASIC6.21□□□□□ -1.42
HADHAP40939 DNAJC19P5-201ENST00000443295 316 ntBASIC6.21□□□□□ -1.42
HADHAP40939 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.21□□□□□ -1.42
HADHAP40939 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.21□□□□□ -1.42
HADHAP40939 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.21□□□□□ -1.42
HADHAP40939 AL133351.3-201ENST00000454998 193 ntBASIC6.21□□□□□ -1.42
HADHAP40939 RN7SL552P-201ENST00000462094 276 ntBASIC6.21□□□□□ -1.42
HADHAP40939 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.21□□□□□ -1.42
HADHAP40939 RN7SL362P-201ENST00000494228 267 ntBASIC6.21□□□□□ -1.42
HADHAP40939 AC008945.1-201ENST00000505144 499 ntBASIC6.21□□□□□ -1.42
HADHAP40939 SNX18P24-201ENST00000505249 671 ntBASIC6.21□□□□□ -1.42
HADHAP40939 AC095052.1-201ENST00000509955 863 ntBASIC6.21□□□□□ -1.42
HADHAP40939 AC090958.1-201ENST00000511122 351 ntBASIC6.21□□□□□ -1.42
HADHAP40939 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.21□□□□□ -1.42
HADHAP40939 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
HADHAP40939 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HADHAP40939 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.21□□□□□ -1.42
HADHAP40939 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.21□□□□□ -1.42
HADHAP40939 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.21□□□□□ -1.42
HADHAP40939 AP001823.1-201ENST00000604056 1003 ntBASIC6.21□□□□□ -1.42
HADHAP40939 AC009237.12-201ENST00000604755 742 ntBASIC6.21□□□□□ -1.42
HADHAP40939 AC069234.4-201ENST00000621276 412 ntBASIC6.21□□□□□ -1.42
HADHAP40939 AL683826.1-201ENST00000624104 627 ntBASIC6.21□□□□□ -1.42
HADHAP40939 AC073593.1-201ENST00000624500 411 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms