Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 PDCL3P5-201ENST00000398028 722 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 MEAF6P1-201ENST00000416092 327 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 Z75741.2-201ENST00000417272 1167 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 NENFP1-201ENST00000419476 466 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 RPL17P17-201ENST00000419491 557 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC019178.2-201ENST00000423595 505 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 MOB1AP1-201ENST00000430903 535 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 RPS10P14-201ENST00000440748 502 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 RPS19P6-201ENST00000441327 433 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 VN1R32P-201ENST00000452234 905 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 NDUFA12P1-201ENST00000455914 406 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 RBMY2EP-202ENST00000456360 940 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 MED28P7-201ENST00000456611 530 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 HPRT1P2-201ENST00000505250 544 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 DCAF13P2-201ENST00000514188 555 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC022880.1-201ENST00000534017 973 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC087465.1-201ENST00000560574 245 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC026458.1-201ENST00000564330 438 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC021749.1-201ENST00000604322 607 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC106791.2-201ENST00000604680 391 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC072039.2-201ENST00000608883 439 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AP000254.1-201ENST00000609934 520 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AL121890.3-201ENST00000618494 516 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AP003072.4-201ENST00000624580 310 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 MTND5P29-201ENST00000458676 1807 ntBASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 KARSP3-201ENST00000571212 1504 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 RNU6-413P-201ENST00000384115 107 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 Y_RNA.559-201ENST00000384686 107 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 RNU1-56P-201ENST00000391303 164 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 OOSP1-201ENST00000398992 1270 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 RSL24D1P4-201ENST00000400938 484 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AL451061.1-201ENST00000407887 862 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC004022.2-201ENST00000413824 193 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 CHCHD3P1-201ENST00000425516 676 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 RAC1P8-201ENST00000427086 527 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 C8orf59P1-201ENST00000429930 303 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 MTND1P32-201ENST00000433043 938 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 NMNAT1P2-201ENST00000435192 860 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC129850.1-201ENST00000436203 508 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AL604028.2-201ENST00000437848 788 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC009518.3-201ENST00000438972 253 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC027124.1-201ENST00000440852 466 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 BX005266.3-201ENST00000443013 1075 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 TAF9P1-201ENST00000445421 515 ntBASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.61□□□□□ -1.35
PTCHD1Q96NR3 DEFA11P-201ENST00000446470 261 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms