Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHROOM3Q8TF72 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 MTHFD2P5-201ENST00000320415 844 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 FUNDC2P3-201ENST00000334716 533 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 SNORD1C-201ENST00000363315 78 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 OR3A2-201ENST00000408891 1076 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC245096.1-201ENST00000413104 546 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 RPS6P23-201ENST00000413224 722 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 RPL23AP18-201ENST00000416139 468 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AL513325.1-201ENST00000417716 1034 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 CFL1P4-201ENST00000451536 498 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AL445665.1-202ENST00000452436 324 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 RPA2P1-201ENST00000556557 721 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 PDZK1P1-202ENST00000425209 1350 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 RN7SKP115-201ENST00000363177 317 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC023141.3-201ENST00000436698 278 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 OR7E116P-201ENST00000448529 957 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 SETP21-201ENST00000514799 892 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 MIR1273E-201ENST00000581165 102 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC092681.3-201ENST00000609463 678 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AL021918.2-201ENST00000613415 194 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AC129778.1-202ENST00000623812 261 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AL591379.1-207ENST00000635982 261 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 OR11H2-202ENST00000641517 1085 ntBASIC6.06□□□□□ -1.44
SHROOM3Q8TF72 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 RN7SKP292-201ENST00000365522 317 ntBASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 AC092017.2-201ENST00000427600 362 ntBASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 AC015983.1-201ENST00000441577 373 ntBASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 AC093166.4-201ENST00000457867 318 ntBASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 CCDC11P1-201ENST00000503137 1162 ntBASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 AC127024.6-201ENST00000621598 424 ntBASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 PARP4P2-201ENST00000446672 3326 ntBASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 AF287957.1-201ENST00000607368 1595 ntBASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SHROOM3Q8TF72 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 MIR143-201ENST00000385300 106 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AP000534.2-201ENST00000412729 568 ntBASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM3Q8TF72 AC007394.1-201ENST00000421941 531 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms