Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 SSXP3-201ENST00000442971 1300 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 AC130304.1-201ENST00000622942 2385 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 RNU1-134P-201ENST00000362935 165 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 RNA5SP279-201ENST00000365513 117 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 RPL12P12-201ENST00000424633 501 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 FTLP8-201ENST00000446770 267 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 RN7SL836P-201ENST00000476140 296 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 RPL38P3-201ENST00000484463 213 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 SNRPCP11-201ENST00000492453 205 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 AC116917.1-201ENST00000520558 305 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 AP001000.1-201ENST00000526843 742 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 MIR5010-201ENST00000582846 120 ntBASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLHC1Q8NHS4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 MTHFD2P5-201ENST00000320415 844 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 MIR551B-201ENST00000384984 96 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AL050305.1-201ENST00000399993 1230 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC023141.3-201ENST00000436698 278 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 OSTCP1-201ENST00000455507 450 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AL603882.1-201ENST00000463059 681 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 OR7E22P-201ENST00000478335 1035 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC083795.1-201ENST00000491760 320 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AP002453.1-201ENST00000492327 668 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC090058.1-201ENST00000498788 435 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 ST13P12-201ENST00000508958 1094 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 snoU109.5-201ENST00000516231 132 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 OR7E158P-201ENST00000524483 910 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC090424.1-201ENST00000535243 736 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC015819.1-201ENST00000613588 663 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AL357562.1-201ENST00000624911 609 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC073488.6-201ENST00000632293 754 ntBASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.68□□□□□ -1.5
CLHC1Q8NHS4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms