Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC004232.1-201ENST00000571388 208 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 MIR3691-201ENST00000578066 90 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 ELOCP28-201ENST00000590044 317 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AC104785.1-201ENST00000603220 588 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AC026979.4-201ENST00000606555 645 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 MIR6820-201ENST00000611508 62 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 Mico1.1-201ENST00000611698 204 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AL731566.2-201ENST00000618971 317 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AC096708.4-201ENST00000620563 552 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AC105105.5-201ENST00000622635 1294 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AC090772.4-201ENST00000623599 362 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 MAPK10-383ENST00000642032 3390 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 AC005839.1-201ENST00000624148 3213 ntBASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SMC1BQ8NDV3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AL669831.5-218ENST00000591702 1873 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AL355377.1-201ENST00000621125 1653 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 MIR375-201ENST00000362103 64 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AL645927.1-201ENST00000396783 406 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AC245096.1-201ENST00000413104 546 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AC002504.1-201ENST00000438281 691 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AC073909.1-201ENST00000447112 999 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 FCF1P6-201ENST00000456841 595 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 EIF2S2P4-201ENST00000461070 984 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 RN7SL326P-201ENST00000477493 296 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 RN7SKP98-201ENST00000517070 156 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AC093510.2-201ENST00000562820 896 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AC005244.1-201ENST00000582566 339 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 MIR4760-201ENST00000585040 80 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AC020765.1-201ENST00000604296 328 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 AC097504.2-201ENST00000608088 454 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 LINC00216-201ENST00000623548 1126 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 HSPA8P19-201ENST00000505359 1517 ntBASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.55□□□□□ -1.2
SMC1BQ8NDV3 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 PSG10P-201ENST00000501199 1500 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 GCNT6-201ENST00000379591 934 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 RBBP4P4-201ENST00000398588 1289 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 RN7SKP125-201ENST00000410481 302 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 AC073464.3-201ENST00000422564 712 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 AC009237.1-201ENST00000442127 744 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 AC004815.1-201ENST00000484185 331 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 WBP1LP3-201ENST00000523033 208 ntBASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SMC1BQ8NDV3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms