Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 SNORA7A-201ENST00000384765 139 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC087752.1-201ENST00000391360 558 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 DHFRP2-201ENST00000414224 547 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 NPM1P48-201ENST00000436002 853 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 BMS1P11-201ENST00000442351 885 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC023271.1-201ENST00000445936 1090 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 RPL12P39-201ENST00000455456 496 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 BMS1P9-201ENST00000457640 885 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC022730.1-201ENST00000473114 568 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 RPS10P28-201ENST00000480396 498 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 GM2AP2-201ENST00000491764 562 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 OR4A43P-201ENST00000532938 908 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 OR4C49P-201ENST00000563891 900 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC090286.3-201ENST00000573133 187 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 WBP1LP11-201ENST00000586141 328 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AP001542.1-201ENST00000591314 200 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC006272.2-201ENST00000594725 163 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AL353729.2-201ENST00000605859 1249 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC022106.1-201ENST00000612834 766 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 uc_338.33-201ENST00000614988 170 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 MIR6807-201ENST00000621968 92 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AC018558.4-201ENST00000622153 281 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AP005435.3-201ENST00000531260 3198 ntBASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC71LQ8N9Z2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 AC144833.1-201ENST00000567953 4089 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 RNA5SP211-201ENST00000365516 117 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 RNA5SP156-201ENST00000410250 110 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 RNA5SP155-201ENST00000411154 129 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 RN7SKP279-201ENST00000411383 298 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 RPL12P12-201ENST00000424633 501 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 NPM1P18-201ENST00000434232 732 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 AC096775.1-201ENST00000437724 448 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 AC096632.2-201ENST00000438139 1239 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 SDC4P-201ENST00000453285 601 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 RNU1-88P-201ENST00000459274 128 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 AC104164.1-201ENST00000460282 590 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 RN7SL350P-201ENST00000492591 299 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 FTH1P11-201ENST00000517577 551 ntBASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC71LQ8N9Z2 AP001994.1-201ENST00000527539 826 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms