Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AL133260.1-201ENST00000405720 405 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AL139805.1-201ENST00000407837 289 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 NPM1P18-201ENST00000434232 732 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 UBE2V2P4-201ENST00000447495 259 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AC004890.1-201ENST00000461005 181 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AC083795.1-201ENST00000491760 320 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AC105420.1-201ENST00000504389 582 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 ZNF519P4-201ENST00000514008 125 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 RNA5SP434-201ENST00000516647 121 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AC012676.3-201ENST00000614983 479 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 SNX18P12-201ENST00000624821 759 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AC005224.3-201ENST00000584683 2140 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 AC114774.1-201ENST00000507410 1770 ntBASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 RN7SKP38-201ENST00000410782 309 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AL590004.3-202ENST00000445883 451 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AC002553.3-201ENST00000453002 341 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 SDC4P-201ENST00000453285 601 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 HMGN1P16-201ENST00000508308 283 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AC111000.6-201ENST00000514471 709 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AL645933.2-201ENST00000606743 1207 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AC097641.3-201ENST00000613523 464 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AC010325.3-201ENST00000641084 394 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 AL442128.2-201ENST00000620246 1824 ntBASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC50Q8IVM0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 MAPK10-338ENST00000641647 3362 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC005261.6-201ENST00000623072 1387 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 MIR551B-201ENST00000384984 96 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 MIR188-201ENST00000385034 86 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 SNRPEP6-201ENST00000407465 277 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 SEPT14P12-201ENST00000442280 560 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AL356121.1-201ENST00000442911 156 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC097359.1-201ENST00000447946 463 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC104164.1-201ENST00000460282 590 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 RN7SL836P-201ENST00000476140 296 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC079080.1-201ENST00000479841 822 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC005017.1-201ENST00000482002 490 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 RPL29P23-201ENST00000486188 442 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AP002453.1-201ENST00000492327 668 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms